DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12866 and CG8389

DIOPT Version :9

Sequence 1:NP_001286425.1 Gene:CG12866 / 36630 FlyBaseID:FBgn0033955 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster


Alignment Length:568 Identity:105/568 - (18%)
Similarity:195/568 - (34%) Gaps:153/568 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 IPPDGGFGWVIMVLSFLAQLIIDGLIFTIGVLLPSIAQDLDVSISSVSFVASVQIGCYFTSGAFS 361
            :.||||:||:::....|..:....::...|.|.....|.:.....:.:.:.::.......||.|.
  Fly     8 VVPDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTFTAALITNLNSLALNFSGLFI 72

  Fly   362 AVLINRFGFRKVAIAGVLCSAVSILASSWSVSLTMLIFFYSVLACAGGITLSMIWASSQLIVGYY 426
            ...|..|..|.||..|.:..|:.:...:::......|..||...   |..|.:|..|:.:.:..|
  Fly    73 GPAIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFV---GFGLGLISPSTFMAINSY 134

  Fly   427 FERYRPMANGFSCSGGGAGIVLFTFLNSWLVPIIGWRNMLRTQAGLIMLILLMVVAYVEVAPTQV 491
            |...|..|.|.|.:|.|.|.||...|..:|:...|:|                   |..::.:.:
  Fly   135 FTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFR-------------------YAVLSMSSL 180

  Fly   492 GMYHLPGSSDTSSDEYYGNFYVHDYLRQSAMTAKSRSILSTYEPRPKKKGCAKFCPSCSNCCWRR 556
            .::.|.|:                            :.|....| |.|....|..          
  Fly   181 SLFGLFGA----------------------------AFLKPLNP-PAKHNNRKHI---------- 206

  Fly   557 RKKSQNADEQNLLIRPAPLEREDLFYTGPAEYEKPHSKENVDGKEFLLMGSDKNTQQVNYGIKNI 621
             :....||.:    :.:||: ..:..|..::.|:  |..|||                       
  Fly   207 -RLLTEADGE----KTSPLQ-VVIVPTNQSKIER--SPPNVD----------------------- 240

  Fly   622 RVDDEPDRISRVHRERRWSNENQKKQNSCRNSRFMLTVLKLFDYRLLKQFEF-KILVASAFLFPM 685
                                      ..|  ||....:::..|..|||...| .|:|..|.::..
  Fly   241 --------------------------TLC--SRMGQRLVQAMDLELLKDLVFWSIIVGMALVYTA 277

  Fly   686 GFNIPFVYSSARTTIPVEYARMIG---PIIGISNLVMRNILGILAYKRR-----SWTLGLCGCGL 742
            ..|...::...........::|:.   .::..:::|.|.:|.|:....|     .:.:|:.|   
  Fly   278 TINFTMIFPGFLGQTAQLNSQMVAFCMSLVAGADIVFRLLLPIVTDHLRIPYRVVFLIGIVG--- 339

  Fly   743 IFGGVSVLISAFYGEN-----LIWFQFLYGFSYAVAPAVYSTLRGLIYVKYLGLSKLTNAFGITS 802
            :|....||     .||     :|....|.|...: |..:.:.|....:.:   ..||....|::.
  Fly   340 LFVARCVL-----AENQTLPVIITMSVLTGMMKS-ATVINNNLTISAHCR---SEKLAGGLGLSM 395

  Fly   803 LAMGMGAFIGTTIAGKLIGITGNYSAAFCFAGLCLIVSGFLKLLLPLL 850
            ::.|:   |..|: |:|:|...:|:.::.   :||...|.:.|::.|:
  Fly   396 MSKGV---IVITV-GQLLGWVRDYADSYL---ICLYAQGVILLVVVLV 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12866NP_001286425.1 MFS 308..>484 CDD:119392 36/175 (21%)
MFS 675..>839 CDD:119392 34/176 (19%)
CG8389NP_611076.2 MFS 19..425 CDD:119392 96/544 (18%)
MFS_1 19..400 CDD:284993 87/512 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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