DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12866 and Slc16a12

DIOPT Version :9

Sequence 1:NP_001286425.1 Gene:CG12866 / 36630 FlyBaseID:FBgn0033955 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_766426.1 Gene:Slc16a12 / 240638 MGIID:2147716 Length:486 Species:Mus musculus


Alignment Length:582 Identity:109/582 - (18%)
Similarity:193/582 - (33%) Gaps:183/582 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IYMVIPPDGGFGWVIMVLSFLAQLIIDGLIFTIGVLLPS----IAQDLDVSISSVSFVASVQIGC 353
            :.:..|||||:||:|:...||..:....:...|.:....    .|||    .|..:::.|: :.|
Mouse     7 VSLASPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFAQD----YSQTAWIHSI-VDC 66

  Fly   354 Y-FTSGAFSAVLINRFGFRKVAIAGVLCSAVSILASSWSVSLTMLIFFYSVLACAGGITLSMIWA 417
            . .......:|:.|:...:...:.|.|.::...:..|::.||..|.....||.   |:..::.::
Mouse    67 MTMLCAPLGSVVSNQLSCQAGIMLGGLLASTGFILGSFATSLKHLYLSLGVLT---GLGFALCYS 128

  Fly   418 SSQLIVGYYFERYRPMANGFSCSGGGAGIVLFTFLNSWLVPIIGWRNMLRTQAGLIMLILLMVVA 482
            .:..:||.||.|.:.:|.|.:.||.|.|..:...:...|:....||..|....|.::        
Mouse   129 PAIAMVGKYFSRRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVL-------- 185

  Fly   483 YVEVAPTQVGMYHLPGSSDTSSDEYYGNFYVHDYLRQSAMTAKSRSILSTYEPRPKKKGCAKFCP 547
                                       |..|...|.:.....:.||:                  
Mouse   186 ---------------------------NLCVCGALMRPITLKEDRSV------------------ 205

  Fly   548 SCSNCCWRRRKKSQNADEQNLLIRPAPLEREDLFYTGPAEYEKPHSKENVDGKEFLLMGSDKNTQ 612
                     .:|:.|.:.|          |||.....|   ..|.:||                 
Mouse   206 ---------PEKNHNRESQ----------REDCKQASP---YSPLTKE----------------- 231

  Fly   613 QVNYGIKNIRVDDEPDRISRVHRERRWSNENQKKQNSCRNSRFMLTVLKLFDYRLLKQFEFKILV 677
                                                 |..:|...::.:  :|..|...:|.:|.
Mouse   232 -------------------------------------CTETRLCCSLQQ--EYGFLLMSDFVVLA 257

  Fly   678 ASAFLFPMGFNIPFVYSSARTTIPVEYARMIG----------PIIGISNLVMRNILGILA----- 727
            .|......|.:..|||.       |.||..:|          .|:|:.::|.....|.|.     
Mouse   258 VSVLFMAYGCSPLFVYL-------VPYALSVGVSHHQAAFLMSILGVIDIVGNITFGWLTDRRCL 315

  Fly   728 --YKRRSWTLGLCGCGLIFGGVSVLISAFYGENLIWFQFLYGFS--YAVAPAVYSTLRGLIYVKY 788
              |:...:...:...||.:..:.:|.:         |..|..||  :......|.||..::..:.
Mouse   316 KNYRYVCYLFAVALDGLCYLCLPMLQT---------FPLLVPFSCTFGYFDGAYVTLIPVVTAEI 371

  Fly   789 LGLSKLTNAFGITSLAMGMGAFIGTTIAGKLIGITGNYSAAFCFAGLCLIVS----GFLKLL 846
            :|.:.|::|.|:......:...:...|||.|:..||:|:|||...|..:|.|    ||::::
Mouse   372 VGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAFLLCGFAMIFSSILLGFVRIV 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12866NP_001286425.1 MFS 308..>484 CDD:119392 36/180 (20%)
MFS 675..>839 CDD:119392 41/182 (23%)
Slc16a12NP_766426.1 MFS_MCT12 18..431 CDD:340982 104/567 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835630
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.