DRSC/TRiP Functional Genomics Resources

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Protein Alignment Targ and slcf-1

DIOPT Version :10

Sequence 1:NP_001286425.1 Gene:Targ / 36630 FlyBaseID:FBgn0033955 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_509762.2 Gene:slcf-1 / 186633 WormBaseID:WBGene00010340 Length:450 Species:Caenorhabditis elegans


Alignment Length:330 Identity:72/330 - (21%)
Similarity:121/330 - (36%) Gaps:89/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 LGSGM-VFI-------YMVIPPDGGFGWVIMVLSFLAQLIIDGLIFTIGVLLPSIAQDLDVSISS 342
            :|.|: :||       .||.....|..|..:.|.::...|: ||..|    .|...|....|..|
 Worm   169 IGPGLGIFILPRTLKFIMVKYNSWGPAWWFLSLFYIVSAIM-GLFIT----KPPSEQTSTFSFGS 228

  Fly   343 VSFVASV------QIGCYFTSGAFSAVLIN---------------RFGFRKV-AIAGVLCSAVSI 385
            ...|...      .|.|:|.|......:.|               .:|::.: :|||..      
 Worm   229 AFKVCKKLEFDLHLIACFFASSVMFIYIANILILMESENIEDKEILYGYQGLTSIAGKF------ 287

  Fly   386 LASSWSVSLTMLIFFYSVLACAGGITLSMIWASSQLIVG-----YYFERYRPMANGFSCSGGGAG 445
                      :|.|..|:.....||.:.:.:..:||.:.     |.|.::| :.|.|:    |.|
 Worm   288 ----------VLTFVMSLNKVHNGIIMILSYVIAQLSLSAAAFCYKFWQFR-LQNAFA----GIG 337

  Fly   446 IVLF-TFLNSWLVPIIGWRNMLRTQAGLIMLIL-LMVVAYVEVAPTQVGMYHLPGSSDTSSDEYY 508
            |.|: ..|..:||.::| .:.|....|...||. :.:::.|.::    |.    .|..|:.|...
 Worm   338 IGLYQACLAPFLVALVG-PSQLAYALGFTNLINGVSIISGVWIS----GF----ASKGTTGDHAR 393

  Fly   509 GNFYVHDYLRQSA--MTAKSRSILSTYEPRPKKKGCAKFCPSCSNCCWRRRKKSQNADEQNLLIR 571
            ..|:|..:|..:|  |:..:.|:|...|...:|       ||        .|:.:::.|.|.|..
 Worm   394 SAFFVSIWLGLAAIVMSIATSSVLMAREKHKRK-------PS--------MKQMKHSSELNALTN 443

  Fly   572 PAPLE 576
            ...:|
 Worm   444 ITSVE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TargNP_001286425.1 MFS_MCT_SLC16 304..842 CDD:340910 65/304 (21%)
slcf-1NP_509762.2 MFS 84..412 CDD:475125 61/277 (22%)

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