DRSC/TRiP Functional Genomics Resources

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Protein Alignment Targ and mct-2

DIOPT Version :10

Sequence 1:NP_001286425.1 Gene:Targ / 36630 FlyBaseID:FBgn0033955 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_503681.2 Gene:mct-2 / 182056 WormBaseID:WBGene00015273 Length:544 Species:Caenorhabditis elegans


Alignment Length:572 Identity:146/572 - (25%)
Similarity:243/572 - (42%) Gaps:104/572 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 VIPPDGGFGWVIMVLSFLAQLIIDGLIFTIGVLLPSIAQDLDVSISSVSFVASVQIGCYFTSGAF 360
            |.|||||:|||::..|||..:.:||:|:|.|.:|..|..|...|.|....|.|:..|||:.:|..
 Worm    37 VTPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVISILTGCYYLAGPL 101

  Fly   361 SAVLINRFGFRKVAIAGVLCSAVSILASSWSVSLTMLIFFYSVLACAGGITLSMIWASSQLIVGY 425
            ::..:|.||.|.|||||.:.:..:.|.|.::.::..|...:.||   |||....::..|.:|:..
 Worm   102 ASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVL---GGIGFGCMYLPSIVILST 163

  Fly   426 YFERYRPMANGFSCSGGGAGIVLFTFLNSWLVPIIGWRNMLRTQAGLIMLILLMVVAYVEVAPTQ 490
            ||.:.|.:|.|.:..|.|.|.::|:.:|..:....|      ...|..|:.|    |.:.::.:.
 Worm   164 YFAKKRSVATGIAVCGSGIGTMVFSTINGPVFDYFG------KDVGSFMVYL----AAIAISGSL 218

  Fly   491 VGMYHLPGSSDTSSDEYYGNFYVHDYLRQSAMTAKSRSILSTYEPRPKKKGCAKFCPSCSNCCWR 555
            ..:...|    ..:.|:              ...|...::..||.:|::       |:       
 Worm   219 FSLLFAP----LKATEH--------------QVKKVAKMVRNYEGKPEE-------PT------- 251

  Fly   556 RRKKSQNADEQNLLIRPAPLEREDLFYTGPAEYEKPHS-----KENVDGKEFLLMGSDKNTQQVN 615
            :|......::...|.||.  ...|.||.|.|...:..|     |.....:..::..::.:|    
 Worm   252 QRLLEDVRNDLEELNRPG--HNADTFYAGNAPVSRSRSNTLDRKAAESAEAHVVHATEHHT---- 310

  Fly   616 YGIKNIRVDDEPDRISRVHRERRWSNENQKKQNSCRNSRFMLTVLKLFDYRLLKQFEFKILVASA 680
                             ||...:.|...:.|::.|          .:.|..||....|..|..|.
 Worm   311 -----------------VHHVVKKSKFTKFKESLC----------SVLDKDLLFSPSFMTLAVSG 348

  Fly   681 FLFPMGFNIPFVY------------SSARTTIPVEYARMIGPIIGISNLVMRNILGILAYKRRSW 733
            ....:.|.:||||            :.|..::||       .:||..|::.|...|::|...:..
 Worm   349 TFTVLSFLVPFVYLALAMKQKNPDFTDAELSLPV-------TLIGAFNIMFRIGCGMVADHPKMS 406

  Fly   734 TLGLCGCGLIFGGVSVLISAFYGENLIWFQFLYGFSYAVAPAVYSTLRGLIYVKYLGLSKLTNAF 798
            .|.:.....|..|.|:|...|..|  :|...::...::...|.::.||.:|.|:.:|:.||:|||
 Worm   407 ALQVSNVATIIAGTSMLFVPFCTE--LWHYVVFCIPFSAGVACFAALRSVICVELIGVEKLSNAF 469

  Fly   799 GITSLAMGMGAFIGTTIAGKLIGITGNYSAAFCFAGLCLIVSGFLKLLLPLL 850
            ||..:.||:||.:|..||.::..|||||..:|...|:....||.:.:.||.|
 Worm   470 GILMVFMGIGAVVGGPIAAQIKDITGNYDISFYVMGIIFAFSGVMTIRLPEL 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TargNP_001286425.1 MFS_MCT_SLC16 304..842 CDD:340910 136/554 (25%)
mct-2NP_503681.2 MFS_MCT_SLC16 45..519 CDD:340910 137/560 (24%)

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