DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12861 and hubl

DIOPT Version :10

Sequence 1:NP_610978.2 Gene:CG12861 / 36628 FlyBaseID:FBgn0033953 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_724671.1 Gene:hubl / 246567 FlyBaseID:FBgn0050364 Length:291 Species:Drosophila melanogaster


Alignment Length:297 Identity:78/297 - (26%)
Similarity:118/297 - (39%) Gaps:85/297 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VLQTVQRTLLMQHSLGSLTIKRTYDTVKKMNLRRRRLEHLKELKRLDEM--CYKAASRNDKKCHP 65
            :|.::.:.:::..||.:|.     ||.:.:::........|:...:.|:  |.....|......|
  Fly     1 MLNSLAKRIVLMPSLIALE-----DTCRTIHVTALMARMGKDFCPVSEVPDCKVVKKRPCSPTDP 60

  Fly    66 PVLPL-------PKMECI------DDPCAE------------------SEMP------------- 86
            ||.|.       |:..|.      .:|||:                  |..|             
  Fly    61 PVRPCSEEGCTQPRYSCCVSTGISANPCADPSKKTKFVSMWKRYKDDGSNRPEAMWHYPEECCPK 125

  Fly    87 -----LDLDHYTPSDKAARKYQRTWCECYMIPKAAVKARKCY-----PNRPRRKFE-CPRVSDVE 140
                 .|:.:|||||| .|::||||.||  .||...|...|:     |...||... |||.:.: 
  Fly   126 CEDTRFDVLYYTPSDK-CREFQRTWWEC--CPKMVPKRVCCWCDAIPPEVLRRDLPICPRSACL- 186

  Fly   141 CRWDPMPCDDVKKKPEILIEVPRIGKWPCCKIPTPGCRDGRIPPSCDAGRIPTCCKKRRTKYPSF 205
                   .:..:|:.:.|.:..:    .|.:|..|.||..||||.|.|...|:.|:|.:..:||:
  Fly   187 -------AEHERKRYKCLNKRYK----GCMRIRMPCCRTARIPPDCRAFPGPSDCEKIKCPFPSY 240

  Fly   206 SECKKELLDPI------PPCECEKKVNMCDVYAYFRH 236
            |||.:|  ||.      |.|||.||.:.|:.....||
  Fly   241 SECVQE--DPAVIPTRPPECECLKKASQCEQIRRGRH 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12861NP_610978.2 DM6 74..235 CDD:214775 61/214 (29%)
hublNP_724671.1 DUF1431 126..275 CDD:429365 55/165 (33%)

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