DRSC/TRiP Functional Genomics Resources

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Protein Alignment Had2 and fadJ

DIOPT Version :10

Sequence 1:NP_610974.1 Gene:Had2 / 36624 FlyBaseID:FBgn0033949 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_416843.1 Gene:fadJ / 949097 ECOCYCID:G7212 Length:714 Species:Escherichia coli


Alignment Length:351 Identity:90/351 - (25%)
Similarity:148/351 - (42%) Gaps:72/351 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IGIVGSGLIGRAWAMLFAA-AGYRVQLYDILESQLATALQELDKDLHRLEEQSALRGNIRASE-- 67
            :||:|.||:|...|.:.|. ||..|::.||....:..||:.....|    |....|.:::|||  
E. coli   311 VGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQL----EGKVRRRHLKASERD 371

  Fly    68 -QFALIGVTTRLEELTREAVHIQECVPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEG 131
             |.|||..||.........: |.|.|.|.|.||:.:.:::::.....|:.||:||:......:..
E. coli   372 KQLALISGTTDYRGFAHRDL-IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAH 435

  Fly   132 LQKRQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQ 196
            ..:.:|::..|..:|...:|||||:|...||...:..|..|....|:.|:.: |:..||..|||.
E. coli   436 ATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVV-RDKAGFYVNRIL 499

  Fly   197 YAILNEVWRLVGSGILSVADVDRVLSQ--------------GLGLRYALLGSLETAHLNAPGGVA 247
            ...:||..|::..| ..|..:|..|.:              |:.....::..||.|         
E. coli   500 APYINEAIRMLTQG-ERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAA--------- 554

  Fly   248 DYFQRFGGEISAVSA----------------TYGETP---------------NTQ-EDRETLAEI 280
             |.:||....:.||:                .||:..               .|| :.|.:..::
E. coli   555 -YGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRISAPQV 618

  Fly   281 ARQCEQLV---SLEKLDER--RAVRD 301
            |.:|..|:   ::..:||:  |:|||
E. coli   619 AERCVMLMLNEAVRCVDEQVIRSVRD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had2NP_610974.1 PRK06129 5..312 CDD:235706 90/351 (26%)
fadJNP_416843.1 fadJ 1..708 CDD:236864 90/351 (26%)

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