DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Had2 and paaH

DIOPT Version :10

Sequence 1:NP_610974.1 Gene:Had2 / 36624 FlyBaseID:FBgn0033949 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_415913.1 Gene:paaH / 945940 ECOCYCID:G6716 Length:475 Species:Escherichia coli


Alignment Length:248 Identity:69/248 - (27%)
Similarity:114/248 - (45%) Gaps:28/248 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QKIGIVGSGLIGRAWAMLFAAAGYRVQLYDILESQLATALQELDKDLHRLEEQSALRGNIRAS-- 66
            |.:.::|||.:|...|.:.|:.|::|.||||....|..|:.    .:|........||.:.|.  
E. coli     6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAID----GIHARLNSRVTRGKLTAETC 66

  Fly    67 EQF--ALIGVTTRLEELTREAVH-------IQECVPEVLHLKKSLYSQLDELLEEQTVVASSTST 122
            |:.  .||.||.         :|       :.|...|.|.:||:|::||.|:...||::.::||:
E. coli    67 ERTLKRLIPVTD---------IHALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSS 122

  Fly   123 FMPSLYSEGLQKRQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREI 187
            ...:..:..::..:::...|..||...:.|||:|....|:...||:..:|.||.|::||.. ...
E. coli   123 ISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRC-HST 186

  Fly   188 QGFATNRIQYAILNEVWRLVGSGILSVADVDRVLSQGLGLRYALLGSLETAHL 240
            .||..||:.....:|.||.:...:.:...:|..|..|.|..   :|.||...|
E. coli   187 PGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFP---MGPLELTDL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had2NP_610974.1 PRK06129 5..312 CDD:235706 68/247 (28%)
paaHNP_415913.1 PaaC-3OHAcCoADH 1..475 CDD:188207 69/248 (28%)

Return to query results.
Submit another query.