DRSC/TRiP Functional Genomics Resources

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Protein Alignment Had2 and Had1

DIOPT Version :9

Sequence 1:NP_610974.1 Gene:Had2 / 36624 FlyBaseID:FBgn0033949 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001285320.1 Gene:Had1 / 32592 FlyBaseID:FBgn0286508 Length:315 Species:Drosophila melanogaster


Alignment Length:311 Identity:174/311 - (55%)
Similarity:232/311 - (74%) Gaps:3/311 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SQKIGIVGSGLIGRAWAMLFAAAGYRVQLYDILESQLATALQELDKDLHRLEEQSALRGNIRASE 67
            ::|:||||||||||:|:||||:.||:|.|||||..|::|||....|:|..||.:..|||.:.|::
  Fly     5 NEKVGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQKELQDLEAKGLLRGKLTAAQ 69

  Fly    68 QFALIGVTTRLEELTREAVHIQECVPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEGL 132
            |||.|..|..|:||.:.|:.:|||:||.|.|||:||.|||.::...|:::||||||:|||:|..|
  Fly    70 QFACISGTNDLKELVKGAIFVQECIPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSADL 134

  Fly   133 QKRQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQY 197
            :.:..:||:||:||||::|||||||||||.|..|::||.||..:||:||||.|||:|||.|||||
  Fly   135 KNKANVLVSHPVNPPYYVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQY 199

  Fly   198 AILNEVWRLVGSGILSVADVDRVLSQGLGLRYALLGSLETAHLNAPGGVADYFQRFGGEISAVSA 262
            |||||.||||.:|||:|.|:|.|:|.|||.|||.||.||||||||. |:|:||:|:...|.|||.
  Fly   200 AILNETWRLVEAGILNVKDIDSVMSNGLGPRYAFLGPLETAHLNAE-GMANYFERYSNTIYAVSE 263

  Fly   263 TYGETPNTQEDRETLAEIARQCEQLVSLEKLDERRAVRDEFLIQLAKLKKQ 313
            |.|.||  :.:.....|:|:|..::|.|::|.:||..||..|.||:.||.:
  Fly   264 TMGPTP--KMEGPVAVEVAKQLGEMVPLDQLAQRRNYRDNCLTQLSILKNK 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had2NP_610974.1 PRK06129 5..312 CDD:235706 173/306 (57%)
3HCDH_N 5..184 CDD:280833 101/178 (57%)
3HCDH 189..>256 CDD:279114 46/66 (70%)
Had1NP_001285320.1 PRK06129 7..310 CDD:235706 172/305 (56%)
3HCDH_N 7..183 CDD:280833 98/175 (56%)
3HCDH 191..>265 CDD:279114 50/74 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449511
Domainoid 1 1.000 163 1.000 Domainoid score I3924
eggNOG 1 0.900 - - E1_COG1250
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 110 1.000 Inparanoid score I2067
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D462830at33208
OrthoFinder 1 1.000 - - FOG0006346
OrthoInspector 1 1.000 - - otm26613
orthoMCL 1 0.900 - - OOG6_105634
Panther 1 1.100 - - P PTHR48075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3389
SonicParanoid 1 1.000 - - X4620
1211.830

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