DRSC/TRiP Functional Genomics Resources

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Protein Alignment Had2 and hacd-1

DIOPT Version :10

Sequence 1:NP_610974.1 Gene:Had2 / 36624 FlyBaseID:FBgn0033949 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_503421.1 Gene:hacd-1 / 178638 WormBaseID:WBGene00019978 Length:299 Species:Caenorhabditis elegans


Alignment Length:253 Identity:62/253 - (24%)
Similarity:104/253 - (41%) Gaps:24/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IGIVGSGLIGRAWAMLFAAAGYRVQLYDILESQLATALQELDKDLHRLE---------EQSALRG 61
            :.|.|:|::|...|.:...|||.|.||...|.:|..|.:.:.|:|.|:.         |.:||..
 Worm    13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEPAALEE 77

  Fly    62 NIRASEQFALIGVTTRLEELTREAVHIQECVPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPS 126
              .|..|..|:.:.|.:.....:|....|.|.|.|.||..::..:.:...:..::.::||:...|
 Worm    78 --IAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQNCMLITNTSSLKLS 140

  Fly   127 LYSEGLQKRQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFA 191
            .....:|........|..||...:.|||:|....|||.......:....:.:.||..| :..||.
 Worm   141 QMLPVIQNPALFAGLHFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVAAK-DTPGFI 204

  Fly   192 TNRIQYAILNEVWRLVGSGILSVADVDRVLSQGLGLRYALLGSLETAHLNAPGGVADY 249
            .||:....|.:..|::..|..:..|:|..:..|            |::...|..:.||
 Worm   205 VNRLLIPYLMDSIRMLERGDATKEDIDTAMRFG------------TSYPMGPIELCDY 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had2NP_610974.1 PRK06129 5..312 CDD:235706 62/253 (25%)
hacd-1NP_503421.1 FadB 13..299 CDD:440862 62/253 (25%)

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