DRSC/TRiP Functional Genomics Resources

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Protein Alignment Had2 and Y71F9B.9

DIOPT Version :9

Sequence 1:NP_610974.1 Gene:Had2 / 36624 FlyBaseID:FBgn0033949 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_491037.3 Gene:Y71F9B.9 / 171839 WormBaseID:WBGene00022130 Length:315 Species:Caenorhabditis elegans


Alignment Length:308 Identity:138/308 - (44%)
Similarity:204/308 - (66%) Gaps:2/308 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIGIVGSGLIGRAWAMLFAAAGYRVQLYDILESQLATALQELDKDLHRLEEQSALRGNIRASEQF 69
            ||.||||||:|.:||.:||::||.||:|||.|.||..||:.::|:|.:|:|....|||:.|.|..
 Worm     6 KIAIVGSGLVGSSWATIFASSGYEVQMYDISEKQLQVALENVEKNLRKLDEHGLQRGNLSADEAL 70

  Fly    70 ALIGVTTRLEELTREAVHIQECVPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEGLQK 134
            ..:..||.|.|:.:.|:::||...|.|:.:...|..:||:.:..|::||||||...|.:::||..
 Worm    71 LRVSTTTSLNEVMKNAIYMQESALEDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLIN 135

  Fly   135 RQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQYAI 199
            :::.|:.||:|||.|:||.|:|||||||...|:|..::|.|:.|.||.||:|:.||..||:|:|:
 Worm   136 KERCLIVHPVNPPLFLPLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFAL 200

  Fly   200 LNEVWRLVGSGILSVADVDRVLSQGLGLRYALLGSLETAHLNAPGGVADYFQRFGGEISAVSATY 264
            |.|.||||..|::.|.|||.|:|.|||.|||..|:.||.|||| .||.|||:|:...|:||....
 Worm   201 LAETWRLVADGVIGVNDVDAVMSAGLGPRYAFNGTCETVHLNA-FGVRDYFKRYAAGITAVLKDM 264

  Fly   265 GETPNTQEDRETLAEIARQCEQLVSLEKLDERRAVRDEFLIQLAKLKK 312
            |..|:. .|.:.:.::..:.|..:|...:.:.:|.|:|.|:::|||||
 Worm   265 GPIPDF-TDEKVINKLEEELEPKMSTLNIRKHQAEREEKLVEIAKLKK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had2NP_610974.1 PRK06129 5..312 CDD:235706 136/306 (44%)
3HCDH_N 5..184 CDD:280833 80/178 (45%)
3HCDH 189..>256 CDD:279114 38/66 (58%)
Y71F9B.9NP_491037.3 PRK06129 3..311 CDD:235706 136/306 (44%)
3HCDH_N 6..185 CDD:280833 80/178 (45%)
3HCDH 190..279 CDD:279114 44/90 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159539
Domainoid 1 1.000 178 1.000 Domainoid score I2119
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43246
Inparanoid 1 1.050 280 1.000 Inparanoid score I1757
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62303
OrthoDB 1 1.010 - - D462830at33208
OrthoFinder 1 1.000 - - FOG0006346
OrthoInspector 1 1.000 - - otm14731
orthoMCL 1 0.900 - - OOG6_105634
Panther 1 1.100 - - O PTHR48075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3389
SonicParanoid 1 1.000 - - X4620
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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