DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)2-HP2 and SYD

DIOPT Version :10

Sequence 1:NP_610972.2 Gene:Su(var)2-HP2 / 36621 FlyBaseID:FBgn0026427 Length:3257 Species:Drosophila melanogaster
Sequence 2:NP_001325348.1 Gene:SYD / 817375 AraportID:AT2G28290 Length:3575 Species:Arabidopsis thaliana


Alignment Length:3368 Identity:652/3368 - (19%)
Similarity:1060/3368 - (31%) Gaps:1185/3368 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GVPRQRRISS----------DSSNSSSIDADIFQKLFHG---KYLDDELLKEGSGSKSQDRRRRP 80
            |.|.|..:..          :..|||...:..|.|.|..   ...::.||.|.......:|..:.
plant   914 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQV 978

  Fly    81 PSP--------SSSDESNDALEALF-CGKSSQSKLSKRRERYESFDSVDDLGEALMRPSH----- 131
            ..|        ...:|..:.:|.|. |..|:..||..:|..    |::..:|.|..|..|     
plant   979 LRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVE----DNLGSIGNAKSRAVHNSVME 1039

  Fly   132 -RLTVPKPSTSQAGSKKSQDAAP----------------------------HRSISNSSSSNIAM 167
             |.....|..||..|::..:..|                            ||.:..|:.:.: :
plant  1040 LRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRL-L 1103

  Fly   168 SSGQTYACPKNKKTNSVANKTAVSANGDKWA--SGKNK-------------------------TV 205
            ...:.|...|..|...:..:|   :.||:.|  .|.||                         ||
plant  1104 DVMEDYLTLKGYKYLRLDGQT---SGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTV 1165

  Fly   206 TIV----KPQ---KTDLRPSRLEPKTDPL-------------------------NLGDLYGDSDS 238
            .:.    .||   :...|..|:..|.|.|                         |.....|..|:
plant  1166 ILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDN 1230

  Fly   239 DSSYEYESDFYGD---QDSDEEDEPVIDISTDTSRTTSVADTVTPVVSDDEGQEPQSELN----- 295
            ::|.|...::...   :...|||.||:|           .|.:..:::..|     ||::     
plant  1231 NTSAEDRKEYLESLLRESKKEEDAPVLD-----------DDALNDLIARRE-----SEIDIFESI 1279

  Fly   296 --QRHANDQESFL-------SSTYERLQSYLSNLSSAEP-------------PPIYKKQNSARKS 338
              ||..|:.|::.       |.::..:.|..|.|.:.:.             |.:.|:.....|.
plant  1280 DKQRKENEMETWNTLVHGPGSDSFAHIPSIPSRLVTEDDLKLLYETMKLNDVPMVAKESTVGMKR 1344

  Fly   339 RSNEKKPSSSQQVKHANEQSAASDKEANKKERDLEPPEASSSAKSSASKASGSRKLYDVANNATL 403
            :........:.|.............|....|.:.|....:.|..|...|..||.:  .:||:.:.
plant  1345 KDGSMGGLDTHQYGRGKRAREVRSYEEKLTEEEFEKLCQTESPDSPQGKGEGSER--SLANDTSN 1407

  Fly   404 EAVERMSLDL---------AEQIMEIDVERSYEFEKRSASKSRSLSRSK----------IPADSS 449
            ..||..|..|         ..|.||....:|:..::.:....|...|.|          :.|.|.
plant  1408 IPVENSSDTLLPTSPTQAITVQPMEPVRPQSHTLKEETQPIKRGRGRPKRTDKALTPVSLSAVSR 1472

  Fly   450 TSQLGHV--------------RKL-----TYSSERLDQPE---PLGTQLRRSKSESLPKRGRPRG 492
            |...|:.              ::|     ..||..|..|:   |.|.|...:.....|.|||.||
plant  1473 TQATGNAISSAATGLDFVSSDKRLEAASHPTSSLALTSPDLSGPPGFQSLPASPAPTPIRGRGRG 1537

  Fly   493 QKQRKNRGATMEEKSANCRDGEGEPVKRKRGRPRKIIPKEEAKTAETENTIESLNTNVPLSIDTS 557
            :.  :.|||                     ||.|::           |..:...|:::....:|:
plant  1538 RS--RGRGA---------------------GRGRRV-----------EGVLHGSNSSITQRTETA 1568

  Fly   558 KE-NPETETVNLEVPIKQDELVSDLDNAKELTGSTNLPQDDIEMASNHQETDLKCAPDRVALDKS 621
            .. ..:.|.....:|....|:||.:..|.|  |||          ||         ||:|:...|
plant  1569 TSLASDAEATKFALPRSASEIVSRVPKANE--GST----------SN---------PDQVSPVHS 1612

  Fly   622 ESTPKVEEEQLCKVDTPSDTALDESKVSESAKNHIE----LEDKDKDKEETQKESP---NGNSKE 679
            .:|       ..:.|..:|..||.....:|. :|::    ||:..:.|....|:.|   ..:|:.
plant  1613 ATT-------ALRSDKAADKDLDAPPGFDSG-SHVQTLNVLENSSERKAFAVKKRPLIQGVSSQH 1669

  Fly   680 TNENSVIVTNEVELPAKKAEAKAEAGNIVEESDSQLAEDFKLAEEILAAEVGKGVEANEVSVTSV 744
            ...|.    ..::||             |..|.:.|               |.|...|:.:|:||
plant  1670 PGPNK----QPLDLP-------------VSTSSTLL---------------GGGPVQNQNAVSSV 1702

  Fly   745 -QGEQNPVIEIVKELEQETISEVVPAQNDQSSVEDQTLADKENPVEKPSPVKAPSSSKDEPPAEE 808
             .|.::|                         .|.:|....:.....||....|.||:   |::.
plant  1703 CDGSKSP-------------------------SEGRTYTALQGVTTAPSDATLPMSSQ---PSDA 1739

  Fly   809 NLPAPDQDPIEQQKTPVAKNQQHDKEHNEAPKAESLSVSDIPSSSVTPSKKRNHSSPANTPK--- 870
            .||...|        ||....:          |:..:|..:|::.....:.||..|...|||   
plant  1740 TLPMSSQ--------PVGSTVE----------AQEANVPSLPAALPAKRRVRNLPSRGETPKRQG 1786

  Fly   871 --KSKEIEALQSSVPRRALRSDKATPQ------NLRESRSKRTLKTELTLLMDDTMRRSSPRLGR 927
              :.:.:.|..:|    :.||...|||      ||..:::|           .|.:.:..|...:
plant  1787 KRRGQPLPATDAS----SARSTGLTPQIEVKVGNLSGTKAK-----------FDAVAKEQPHFSQ 1836

  Fly   928 SPA-ESHSSHERSPMEKKVTVSKLAKDLITIDKEKEIELKSLPDASETKDVKITKTTTASDTSIL 991
            |.| :.|||...|                     :||.    .|.|.|......:|...:|.:.:
plant  1837 SVAPDIHSSGSLS---------------------QEIR----RDTSGTGGSARKQTADVTDVARV 1876

  Fly   992 TDENPSSSKTEMKKLK-GKPLKAKKMSRTSETEVKKAIADSNEDIPSIFSIKCVEEHLTSSESEQ 1055
            ..|  ..|:|.:.|.| |:|      |.|:.|.|..|      ..|...::..||.|.....|..
plant  1877 MKE--IFSETSLLKHKVGEP------SATTRTNVPDA------QSPGEMNLHTVETHKAEDSSGL 1927

  Fly  1056 KDEKEELLCPKPQIDCTNTDLEQSTAIETDTEQVEEKRSNRRKSRRIRNEKFKTETD-------- 1112
            |:  :|.|....:.|...:|:......:..|     ..|...|...|.:.|...|.:        
plant  1928 KN--QEALYNLSKADKLVSDIPHPVPGDLTT-----SGSVANKDVDIGSSKVAAENELVKIPGGD 1985

  Fly  1113 --------TLSDHLDAKKAENASLEISMRPKCTLE------TQQSDPVTAKNKRNSGRLSRKEKS 1163
                    :|.:.|.||    :|||     |||.:      ..|....|..:...:..|:.:..|
plant  1986 VDSSVIQLSLGNTLTAK----SSLE-----KCTADQLLGEKLSQEGETTPASDGETCHLAEETAS 2041

  Fly  1164 VINAAKSEKDKSPSAISQSTERKQL----LNENPSKKDKKTEQSGNKKEAVV-------GPLDKT 1217
            .::..:||    |:| |.||..:.|    |.:|.|.:|:....:|:|:||::       ....|.
plant  2042 SLSYVRSE----PTA-SASTTAEPLPTDKLEKNISFQDEVKTLNGDKREAILLSSEEQTNVNSKI 2101

  Fly  1218 ETSS-----------------STNIID--------KKSNESFDSAMQPSDRLNQKESAFTK---- 1253
            ||:|                 |.::.:        |.|.|...|.::|.:..|..:...:.    
plant  2102 ETNSEELQASRTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLEPDELPNAGQKGHSSIDLQ 2166

  Fly  1254 -LSSISSPKKIMKDQDKDLDALSKGGDSNPTIRDTGEDSRQTD----KKHQENDTKHEEEDSSKL 1313
             |..::|.:..|...|||.|.:||..|    |....|:|....    .|....||:.|:.:.:||
plant  2167 PLVLVTSNENAMSLDDKDYDPISKSAD----IEQDPEESVFVQGVGRPKVGTADTQMEDTNDAKL 2227

  Fly  1314 KANIDETKSSSEKDAEPISKDSSQDSAKPRLSKPKSRNKRKKNEKKPNDSIAES--DIEGGFQVN 1376
            ...........||..:.:......|:                 |:.|.:|:::.  .:...:...
plant  2228 LVGCSVESEEKEKTLQSLIPGDDADT-----------------EQDPEESVSDQRPKVGSAYTQM 2275

  Fly  1377 TETVQAT----CSTPSESNKKDM---VKSDETNEEPNLSETEIGRIRKRGQAFHIENPK---DDL 1431
            .:|.:|.    ||..||..:|.:   :..|:.:.|.|..|:    :..:|    ::.||   .|.
plant  2276 EDTDEAKLLMGCSVESEEKEKTLQSHIPGDDADTEKNPEES----VSVQG----VDRPKVGTTDT 2332

  Fly  1432 HITPQNENQSIAGVNF---EKQVPLPESVESDTPIMKIPTKTYLMCTKNKTSLLSASEDPDIVLE 1493
            .:...|:.:.:.|.:.   ||:..|...:..|                          |.|....
plant  2333 QMEDTNDAKLLVGCSVASEEKEKTLQSHIPGD--------------------------DADTEQN 2371

  Fly  1494 PQKLITTSKGDSNPDLDNANNLETSSTQDPKEHEFSDQTFTDNSDIIPSCTKKSQIVFPTTPTKS 1558
            |::.::. :|.:.|.:.|||.            :..|   ||.:.::..|:.:|:         .
plant  2372 PEESVSV-QGVNRPKVGNANT------------QMED---TDEAKVLVGCSVESE---------E 2411

  Fly  1559 SDQTKNSFITPNRSPKSKRNVSKEAKRLDNSFEESQNAASESSASKVQKELRTPTASCRKLRVLI 1623
            .::|..|.| |.....:::|..:..    ::|:..::..:::....:..                
plant  2412 KEKTLQSHI-PGDDADTEQNPEESV----SNFDRPKDGTADTHMEDIDD---------------- 2455

  Fly  1624 KRTPTSSLPTNSRKSIFKKTPAKSKRLTKILE--SMEKTPSREPSVSLGEVNPDSDPVAAESVAV 1686
                                       .|:|.  |:|   |.|...||....|..|       ||
plant  2456 ---------------------------AKLLVGCSVE---SEEKEKSLQSHMPSDD-------AV 2483

  Fly  1687 LH---ESDRDLESNEI--------PNEEV-----FEDTEEASAE----DTDNKLKKKEDDHELEV 1731
            ||   |:.:|.:.:::        |..||     ||....|..:    |..|::.:...|     
plant  2484 LHAPFENTKDSKGDDLHGESLVSCPTMEVMEQKGFESETHARTDSGGIDRGNEVSENMSD----- 2543

  Fly  1732 NDICAASKNPITDDSTKDASSNKSTDSDVLQETKDELSNSLINATQGEDTPIKELTEEEVPNNKT 1796
                 ..|..|:.....|||.:.:...|   :|...|...:......|:..:........||...
plant  2544 -----GVKMNISSVQVPDASHDLNVSQD---QTDIPLVGGIDPEHVQENVDVPASPHGAAPNIVI 2600

  Fly  1797 VEDESKKQEILKDLEPDNAALEEDTASTAKAAEEMDLYIKEKSNVKSVLAEPETDVTDDEELA-- 1859
            .:.|.   .:...:.||:.|.:.::.|.           .||:|:.|   |...||:.|.:::  
plant  2601 FQSEG---HLSPSILPDDVAGQLESMSN-----------DEKTNISS---EQVPDVSHDLKVSQD 2648

  Fly  1860 QSPIP--------NSSETTSVTDDPEPSTSSVVKRSLRKREADSSQPDEAAKRKQRQDVEKSLTG 1916
            |:.||        |..|...|...|......||.....:.::.|..||:...:....:.||..| 
plant  2649 QTDIPPVGGIVPENLQEIVDVPASPHGVVPDVVVSQSEEIQSPSILPDDVPGQPDDGNCEKMDT- 2712

  Fly  1917 KKEQVKPARRRQLAEVEERPSLKRSKTESEAKSTVQGKYISIIGNETIM-SSTTAPIRETNREAA 1980
                           ::...|:.                |.|...:|.. ||:|.|..|.....:
plant  2713 ---------------MQNNTSID----------------IGITSGKTCQPSSSTQPEDENRNSLS 2746

  Fly  1981 STSPS---------------ARKSAVQEAKHVETTKHIILGPPGKKLLHSDSPAAEVKKPMVQTL 2030
            ...||               :.:|.|:.:..:...:...:.|| :.:|.......|.|:|.::  
plant  2747 HCEPSEVVEQRDSRDQVCIGSVESQVEISSAILENRSADIQPP-QSILVDQKDIEESKEPGIE-- 2808

  Fly  2031 LSSTLSLQ-------KPSTLDDGSPLKIRKSLKKSIADENIDGDQSIFSSSSVLNKNTSVVAPRK 2088
             |:.:||.       :||.|.|...::..|.                               |..
plant  2809 -SADVSLHQLADIQAEPSNLVDQMDIEESKE-------------------------------PGT 2841

  Fly  2089 VNISVSLLQSKDTQVETAASSSETPILTKKEKLKTQKSTKKPEGNKKTESKKKSLVQ------GP 2147
            .:..|||.|..|.|...:       ||.  :::.|:|| |:|    .|||...||.|      ||
plant  2842 ESADVSLHQLADIQPGPS-------ILV--DQMDTEKS-KEP----GTESADVSLHQLADIQPGP 2892

  Fly  2148 -----QMKTQKSEEA------VS---------GPKILNKYLKSETESSRKTVSTVTGRKQIGQLE 2192
                 ||.|:||:|.      ||         ||.||...:.:| |.....||          |.
plant  2893 SILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTE-EFKNPDVS----------LH 2946

  Fly  2193 VLKKPESRKSEESLVEAISRKKQSQVQRLSKIDGRKSEGTSLPQPDVS-KSETALKAALPKETEF 2256
            .|...|...|..::.:.|..|.||.|:         :.|:.|  .||| :..|..:..||..:| 
plant  2947 QLADIEPSLSISAVQKNIEDKDQSHVE---------TAGSEL--VDVSAECSTEPQVQLPPSSE- 2999

  Fly  2257 PVQDAEIEKMSKGRGHQNAVKN----TKTEQPKSKPKTEVRSLQAEAATELMDSMDSQSDVSDIR 2317
            ||.|..:        |..|.|:    ..|:...|.||||    :..|.::|.|:..|.|      
plant  3000 PVGDMHV--------HLGASKSEIVAEGTDFSSSLPKTE----EENAKSQLADTEPSSS------ 3046

  Fly  2318 ATFPESQGIFNVPGHMTRAISSNRSLAPTPTPMSDSQRNASKERFTPVSDQKKPIRESQTLSKRR 2382
                            ..|:..|         :.|....|..| |..||                
plant  3047 ----------------LTAVQKN---------IEDQVETAGCE-FVVVS---------------- 3069

  Fly  2383 ARGGRNQPLVSKRKAGE--AEDGTAVINPKRPREMDEEDHPQQNDHVQESAFAAFPVKITAASSV 2445
             .|...:|.|....:.|  ..:||...:......:|...|              ....:..|.:.
plant  3070 -TGCSTEPQVQLPPSAEPVVAEGTEFPSSLLMTGVDNSSH--------------LMTGVDNAKTH 3119

  Fly  2446 IPQVVRSTGNTVPQNISPRKLCVKINRRPYNKWLRSTQERNEEQEGSRNVTSLPLLGETSETDSA 2510
            :..||.|:..|                         |.|:|.|.:....||:    |.....|..
plant  3120 LADVVPSSSPT-------------------------TMEKNIEAQDQDQVTT----GGCGLVDVL 3155

  Fly  2511 AESMSESILQSQVQSEPAIQPLPASQPDSCTLQASDLRIRESSAQLAPIAAYDSPAANDSSTSPA 2575
            .|..||    .|:|..|:.:|:.:...:..||..::  ...:.:|||.|....||:..:.:.. |
plant  3156 TECSSE----PQLQLPPSAEPVISEGTELATLPLTE--EENADSQLANIEPSSSPSVVEKNIE-A 3213

  Fly  2576 LDIAPESAQTAKATLNTALCPSTEKHLPDEPTLLESSKKVAEPQKLQTFQAKCLPVPIPEVKSEP 2640
            .|  .:..:||...|.:..|.|                   |||           |.:|. .:||
plant  3214 QD--QDQVKTAGCELVSTGCSS-------------------EPQ-----------VHLPP-SAEP 3245

  Fly  2641 E-DI---MDEHSPNEPMPMVAAAPATPQPHAITE---------DAGP------------DTIQVN 2680
            : ||   :.|...:|.|.:|....|.|....:||         |..|            |..||.
plant  3246 DGDIHVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNAESQLADTEPFTSPTVVEKNIKDQEQVE 3310

  Fly  2681 TLG-------VSTSSRPLELHSIPSASDPDGNPNAIGQTKMYSFLYPKRYKQSYDDVGLDFCCPN 2738
            |.|       ...||.| ::...|||...:|....:.:||                         
plant  3311 TTGCGLVDDSTGCSSEP-QVQLPPSAEPMEGTHMHLEETK------------------------- 3349

  Fly  2739 LDGPMRAIDFTRLHSKAEVPVLEI------PQF-LVITTKFISKADK---------NMPSKVRAK 2787
                           |:|..|.||      |.| |::....|...|:         |:||....:
plant  3350 ---------------KSETVVTEIQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINVPSGCSTE 3399

  Fly  2788 LEL-LDKSKERDSS---KLTPTATTPTADPTGPSSFSPAPASV---------GPATQPFPSIIQN 2839
            .:: |..|.|.:..   .|.....:.|....|    |..|:|:         |...:..||:...
plant  3400 PQIQLSSSAEPEEGMHIHLEAAMNSETVVTEG----SELPSSLPMTEDENADGQLAEVEPSVSLT 3460

  Fly  2840 LLSAPLPD---------------PGLFNHPTTVDPSTSTPVVSGSS--SSTTISADLDSLSKQLP 2887
            :....:.:               ||..:.|....| .|...|.|..  ..|.::.|.|| :..||
plant  3461 VEQTNIEEKDHIETAECELVDVSPGCSSQPEVKFP-PSPDAVGGMDVHLETVVTEDTDS-NSSLP 3523

  Fly  2888 RGTKLIKKSVQQVATNPS--------------LAGTSMVIN---ASPSFIQLP 2923
                   |:.::.|.|||              :.||.:..|   |..|.|::|
plant  3524 -------KTEEKDAENPSDRLDGESDGTTVATVEGTCVESNSLVAEESNIEVP 3569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-HP2NP_610972.2 PspC_subgroup_1 <503..>842 CDD:468201 62/347 (18%)
PTZ00449 <739..1091 CDD:185628 75/365 (21%)
PTZ00108 <1132..1374 CDD:240271 59/294 (20%)
PRK05901 1624..>1822 CDD:235640 40/219 (18%)
PTZ00121 <1671..2360 CDD:173412 160/772 (21%)
SYDNP_001325348.1 QLQ 277..310 CDD:214931
PLN03142 604..>1216 CDD:215601 55/309 (18%)
SnAC 1282..1369 CDD:464219 12/86 (14%)
PHA03307 1491..>1819 CDD:223039 97/472 (21%)
rne <3168..3342 CDD:236766 48/210 (23%)
Blue background indicates that the domain is not in the aligned region.

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