DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(var)2-HP2 and leo1

DIOPT Version :9

Sequence 1:NP_610972.2 Gene:Su(var)2-HP2 / 36621 FlyBaseID:FBgn0026427 Length:3257 Species:Drosophila melanogaster
Sequence 2:NP_996950.1 Gene:leo1 / 404599 ZFINID:ZDB-GENE-040426-2435 Length:696 Species:Danio rerio


Alignment Length:765 Identity:153/765 - (20%)
Similarity:279/765 - (36%) Gaps:153/765 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 NLGDLYGDSDSDSSYEYESDFYGDQDSDEEDEPVIDISTDTSRTTSVADTVTPVVSDDEGQEPQS 292
            ::.:|:| ||.||..| :.|......||.:.|.....|..:...::.:|.......|::|.:|.:
Zfish     3 DMDELFG-SDGDSDNE-QRDSGSGSGSDSDHERPRSASNASGSESAQSDRDHDDDEDEDGGKPSN 65

  Fly   293 ELNQRHANDQESFLSSTYERLQSYLSNLSSAEPPPIYKKQNSARK--SRSNEKKPSSSQQVKHAN 355
            :  :...:|.|....|.:...|...|..|.:       :.:.:|.  ||.:..:.|.||..:..|
Zfish    66 K--ELFGDDSEDEHGSQHSGSQHSGSRHSGS-------RHSGSRHSGSRHSGSQHSGSQSERSGN 121

  Fly   356 EQSAA-------SDKEANKKERDLEPPEASSSAKSSASKASGSRKLYDVANNATLEAVERMSLDL 413
            :..|.       |..||::.|:|.|..:.........|.|||              |..|.|   
Zfish   122 QSDATMHSDNEHSMSEAHRGEQDDEDDDDRGHRSDVGSPASG--------------AGSRRS--- 169

  Fly   414 AEQIMEIDVERSYEFEKRSASKSRSLSRSKIPADSSTSQLG--HVRKLTYSSERLDQPEPLGTQL 476
                           ::.|.|........:..|.|..|..|  |........:.....|..|...
Zfish   170 ---------------DRGSGSPGSEAGSPRSEAGSGHSDPGTPHTDGEGSGKDAHSGDEKWGGDG 219

  Fly   477 RRSKSESLPKRGRPRGQKQRKN-RGATMEEKSANCRDGEGEPVKRKRGRPRKIIPKEEAKTAETE 540
            :..:||...|:.....:::|.: .|...:.:|....|.|.:..::|:        |:.|..::::
Zfish   220 KSDQSEDEDKQQNSDDERERSDEEGERQKSESIKGSDSEDDFTRKKK--------KKIASDSDSD 276

  Fly   541 NTIESLNTNVPLSIDTSKENPETETVNLEVPIKQDELVSDLDNAKELTGSTNLPQDDIEMASNHQ 605
            :..|:.....|.:.|...|              .|::.||.|..|.||....|..|         
Zfish   277 SDAETQGGKKPAANDLFGE--------------ADDISSDSDAEKPLTPGQPLDAD--------- 318

  Fly   606 ETDLKCAPDRVALDKSESTPKVE---EEQLCKVDTPSDTALDESKVSESAKNHIELEDKDKDKEE 667
                    |.:..|:.|..|..|   |.::.||.|...:.|...|:    .|.:.:|.:..|.:.
Zfish   319 --------DGMEGDQPEEEPAPETRIEVEIPKVSTDLGSDLYFVKL----PNFLSVEPRPFDPQY 371

  Fly   668 TQKESPNGNSKETNENSVIVTNEVELPAKKAEAKAEAGNIVEESDSQLAEDFKLAEEILAAEVGK 732
            .:.|..:....: .|....:..:||...:....:.|.||.|:||::::.   |.::..::..:|.
Zfish   372 YEDEFEDEEMLD-EEGRTRLKLKVENTIRWRSRRDEEGNEVKESNARIV---KWSDGSMSLHLGN 432

  Fly   733 GVEANEVSVTSVQGEQNPVIEIVKE---LEQETISEVV----PAQNDQSSVEDQT--LADKENPV 788
              |..:|....:||:.|.:  .:::   |:.:.:.:..    |...|.::....|  |||:.:..
Zfish   433 --EVFDVYKAPLQGDHNHL--FIRQGTGLQGQAVFKTKLTFRPHSTDSATHRKMTLSLADRCSKT 493

  Fly   789 EKPSPVKAPSSSKDEPPAEENLPAPDQDPIEQQKTPVAKNQQHDKEHNEAPKAESLSVSDIPSSS 853
            :|   ::.             ||...:|| |.|:..:.|.::           |.|..|....|.
Zfish   494 QK---IRI-------------LPMAGRDP-ESQRNEMIKKEE-----------ERLRASIRRESQ 530

  Fly   854 VTPSKKRNHSSPANT----PKKSKEIEALQSSVPRRALRSDKATPQNLRESRSKRTLKTELTLLM 914
            ....:::.|....|.    |.:..|.|..:.|:...|::|.......|||.|::...........
Zfish   531 QRRMREKQHQRGLNAGYLEPDRYDEDEEGEESISLAAIKSKYKGGGGLREERARIYSSDSDEGSD 595

  Fly   915 DDTMRR--SSPRLGRSPAESHSSHERSPMEKKVTVSKLAKDLITIDKEKE 962
            :|..:|  .:.||. |..|..:|.:|...|.:.:.||..|..:..|:|.|
Zfish   596 EDKAQRLMKAKRLD-SDEEGENSGKRKAEEDEESASKKPKKYVISDEEDE 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)2-HP2NP_610972.2 MDN1 <596..845 CDD:227596 48/260 (18%)
PTZ00449 <739..1091 CDD:185628 50/239 (21%)
PTZ00108 <1132..1374 CDD:240271
PTZ00121 <1720..>2291 CDD:173412
leo1NP_996950.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..336 81/414 (20%)
PHA02664 <161..260 CDD:177447 23/130 (18%)
Leo1 352..510 CDD:281933 34/186 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..560 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..696 15/62 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.