DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and SAFB2

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_055464.1 Gene:SAFB2 / 9667 HGNCID:21605 Length:953 Species:Homo sapiens


Alignment Length:295 Identity:54/295 - (18%)
Similarity:98/295 - (33%) Gaps:111/295 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRE--------------RMHK 88
            |:.|:|.|                    ...||.|:..|.....|::              :..|
Human   354 RKFDFDAC--------------------NEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEK 398

  Fly    89 SREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARA 153
            .|....:.|.:.|.||::.|....::.||:|||.:...::|.:|::..:|.:.|:......:|..
Human   399 GRVGSGSGRNLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATK 463

  Fly   154 AKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDN 218
            ........|:.||.|.|:.:              ..:|.||   ..|.|:...|..::.:|.   
Human   464 CISHLHRTELHGRMISVEKA--------------KNEPAGK---KLSDRKECEVKKEKLSSV--- 508

  Fly   219 YRDRY---------------------------DYRNDRYDRN-LRRSP-SRNRYTR--------- 245
              ||:                           |.:.:..|:: |:..| :|:|.|:         
Human   509 --DRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEEKDQDELKPGPTNRSRVTKSGSRGMERT 571

  Fly   246 -----------------NRSYSRSRSPQLRRTSSR 263
                             :||..||...|.|::.|:
Human   572 VVMDKSKGEPVISVKTTSRSKERSSKSQDRKSESK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 20/78 (26%)
SAFB2NP_055464.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
SAP 30..64 CDD:128789
PLN03124 31..>153 CDD:215591
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..114
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..404 11/69 (16%)
RRM_SAFB1_SAFB2 406..481 CDD:410080 19/74 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..665 14/82 (17%)
Interaction with SAFB1 600..953 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 684..953
Nuclear localization signal. /evidence=ECO:0000255 713..730
RcnB 756..>843 CDD:444206
Blue background indicates that the domain is not in the aligned region.

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