DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tra2 and IST3

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_012270.1 Gene:IST3 / 854821 SGDID:S000001444 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:124 Identity:28/124 - (22%)
Similarity:54/124 - (43%) Gaps:28/124 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IGVFGLNTNTSQHKVRELFNKYG-PIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIE 162
            |.:..||...::..:..:|::|| |::.| :..|..|..|:||.::.:|.......|.|:.:|.:
Yeast    33 IYIGNLNRELTEGDILTVFSEYGVPVDVI-LSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFK 96

  Fly   163 VDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNYRD 221
            :.||.:::|       ||                 .:.|:|..:.|::......|  ||
Yeast    97 IGGRALKID-------HT-----------------FYRPKRSLQKYYEAVKEELD--RD 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 20/76 (26%)
IST3NP_012270.1 RRM_ist3_like 22..109 CDD:409845 22/100 (22%)

Return to query results.
Submit another query.