Protein Alignment tra2 and SR34

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_850933.1
• Gene: SR34 / 839262
• AraportID: AT1G02840
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 230
• Identity: 64/230 - (27%)
• Similarity: 98/230 - (42%)
• Gaps: 63/230 - (27%)

  Fly    94 QASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSC 158
            ::||.:.|..|..:..:.:|.:||:||||:.:|.:.:   ..|..|:.|:.|:...||..|....
plant     4 RSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKV---PPRPPGYAFVEFDDARDAEDAIHGR 65

  Fly   159 SGIEVDGRRIRVDFSI-TQRAHTPTPGVYLG--------------RQPRGKA---------PRSF 199
            .|.:.||.|:||:.:. .:|:...|.|.:.|              |.|..::         |.|.
plant    66 DGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSA 130

  Fly   200 S-------PRRG-----RRVYHDRSAS----PYDNYRD-RY--------DYRN---------DRY 230
            |       .|:|     .:||.|...:    .|..|.| :|        ::||         ..|
plant   131 SWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREY 195

  Fly   231 D-RNLRRSPSRNR-YTRNRSYSRSRSPQLRRTSSR 263
            | |...|||||.| |:::||.||.||....|:.||
plant   196 DSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSR 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	25/79 (32%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:410011	23/73 (32%)
		RRM2_SF2_plant_like	119..194	CDD:410014	14/74 (19%)