Protein Alignment tra2 and PABN1

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001190511.1
• Gene: PABN1 / 835186
• AraportID: AT5G51120
• Length: 265
• Species: Arabidopsis thaliana
• Alignment Length: 190
• Identity: 49/190 - (25%)
• Similarity: 81/190 - (42%)
• Gaps: 34/190 - (17%)

  Fly    53 SSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELF 117
            |.|...:.||:..|....:....||.|:.::|.:.        ||.|.|..::...:..:|::.|
plant   105 SFSESMNLSRNLLEFEYEKEIINSGVSAAEKEEVD--------SRSIYVGNVDYACTPEEVQQHF 161

  Fly   118 NKYGPIERIQMVIDAQTQRSRGFCFIYF---EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAH 179
            ...|.:.|:.::.|...| .:||.::.|   |.:.::....:|    |:.||:|:|     ....
plant   162 QSCGTVNRVTILTDKFGQ-PKGFAYVEFVEVEAVQNSLILNES----ELHGRQIKV-----SAKR 216

  Fly   180 TPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNYRDRYDY-RNDRYDRNLRRSP 238
            |..||:   ||.||:. |.|.|.||        ..|...:...|.| |..|:.|.:|..|
plant   217 TNVPGM---RQFRGRG-RPFRPMRG--------FMPGVPFYPPYAYGRVPRFRRPMRYRP 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	20/81 (25%)
PABN1	NP_001190511.1	SF-CC1	<56..>213	CDD:273721	29/125 (23%)
		RRM_II_PABPs	142..213	CDD:409747	18/80 (23%)