Protein Alignment tra2 and AT5G10350

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_196597.1
• Gene: AT5G10350 / 830899
• AraportID: AT5G10350
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 226
• Identity: 44/226 - (19%)
• Similarity: 91/226 - (40%)
• Gaps: 48/226 - (21%)

  Fly    22 SASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSR-----SSSESPPPEPRHRSGRSSR 81
            ||:...|.|..:..|.|..:.:       :.:::.|..:::     .:::.|.....::.|:...
plant    29 SAADEDAVTELAEMKRRLKEME-------EEAAALREMQAKVEKEMGATQDPASMAANQEGKEEV 86

  Fly    82 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYF- 145
            |             :|.:.|..::...:..:|:..|...|.:.|:.:::|...| .:||.::.|
plant    87 D-------------ARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQ-PKGFAYVEFV 137

  Fly   146 --EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVY 208
              |.:.:|....:|    |:.||:::|     ....|..||:      :...|..|:|..|.| :
plant   138 EVEAVQEALQLNES----ELHGRQLKV-----SPKRTNVPGM------KQYHPGRFNPSMGYR-F 186

  Fly   209 HDRSASPYDNYRDRYDY-RNDRYDRNLRRSP 238
            ......||  :...|.| :..|:.|.:|..|
plant   187 RRPFVPPY--FYSPYGYGKAPRFRRPMRYMP 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	18/81 (22%)
AT5G10350	NP_196597.1	PIN_SF	<6..70	CDD:475124	7/47 (15%)
		RRM_II_PABPs	90..161	CDD:409747	17/80 (21%)