DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and AT5G06210

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_196239.1 Gene:AT5G06210 / 830508 AraportID:AT5G06210 Length:146 Species:Arabidopsis thaliana


Alignment Length:89 Identity:27/89 - (30%)
Similarity:50/89 - (56%) Gaps:0/89 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            ||:..|::..:.|.|:|.|.:...|:|:|..:.||:||.|:.|....:|:.|....:|.:::||.
plant    40 GLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRT 104

  Fly   168 IRVDFSITQRAHTPTPGVYLGRQP 191
            |.||::..:::.....|..:.|.|
plant   105 IFVDYAKAKQSLGGGGGYPIARGP 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 24/71 (34%)
AT5G06210NP_196239.1 RRM_SF 34..113 CDD:473069 24/72 (33%)

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