Protein Alignment tra2 and AT5G04600

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_196080.1
• Gene: AT5G04600 / 830337
• AraportID: AT5G04600
• Length: 222
• Species: Arabidopsis thaliana
• Alignment Length: 119
• Identity: 23/119 - (19%)
• Similarity: 53/119 - (44%)
• Gaps: 33/119 - (27%)

  Fly    47 SRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMH--KSREHPQASRCIGVFGLNTNTS 109
            :::..:.:.::.:.|.|||:.|.|:    :.:.|.|...:.  .:|:.|          :.|...
plant     5 AKKALKKNMKKVAASASSSQLPLPQ----NPKPSADFLPLEGGPARKAP----------VTTPPL 55

  Fly   110 QHK-----------------VRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFE 146
            |:|                 :...|:::|.::|:::..:.:|.:|:.|.||.||
plant    56 QNKATVLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFE 109

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	13/68 (19%)
AT5G04600	NP_196080.1	RRM_NIFK_like	61..134	CDD:409748	10/49 (20%)
		PABP-1234	80..>204	CDD:130689	10/30 (33%)