Protein Alignment tra2 and AtRZ-1c

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_196048.1
• Gene: AtRZ-1c / 830307
• AraportID: AT5G04280
• Length: 310
• Species: Arabidopsis thaliana
• Alignment Length: 229
• Identity: 59/229 - (25%)
• Similarity: 82/229 - (35%)
• Gaps: 73/229 - (31%)

  Fly    94 QASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSC 158
            :.|| |.|.||:...:...:...|:::|.|...|::::..|.|||||.||.|   :|.||..:|.
plant     5 EGSR-IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITF---ADRRAMDESI 65

  Fly   159 SGIEVDGRRIRVDF-----SITQ----------RAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVY 208
            .  |:.||    ||     |:.:          .:|....|...|....||.........|.||.
plant    66 R--EMHGR----DFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGGGRVG 124

  Fly   209 HDR------------------------------SASPY-------------DNYRDRYDYRNDRY 230
            .|.                              .||.|             |.|.||..|.:|||
plant   125 EDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVDRERYIDDRY 189

  Fly   231 DRNLRRSPSRNRYTRNRSYSRSRSPQLRRTSSRY 264
            | ...|..:|:|:....:|    .|:.|..|.||
plant   190 D-GAARYGARDRFDSREAY----IPRDRYASDRY 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	29/83 (35%)
AtRZ-1c	NP_196048.1	RRM	8..89	CDD:440488	28/90 (31%)
		zf-CCHC	128..143	CDD:395050	0/14 (0%)
		U2AF_lg	170..>256	CDD:273727	18/54 (33%)