Protein Alignment tra2 and AT4G14300

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_193166.2
• Gene: AT4G14300 / 827071
• AraportID: AT4G14300
• Length: 411
• Species: Arabidopsis thaliana
• Alignment Length: 217
• Identity: 49/217 - (22%)
• Similarity: 80/217 - (36%)
• Gaps: 64/217 - (29%)

  Fly    38 RRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVF 102
            |..|.....||..|:.|.|..:.:.|.|          ||..:.::            ::.|.|.
plant    73 REVDVKRAMSREEQQVSGRTGNLNTSRS----------SGGDAYNK------------TKKIFVG 115

  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSC---SGIEVD 164
            ||....:..:.|:.|..|||:..:.::.|..|.|.|||.|:.|    |:..|.||.   :..::.
plant   116 GLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSF----DSEDAVDSVLHKTFHDLS 176

  Fly   165 GRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNY---RDRYDYR 226
            |:::.|     :||                .|:..:|..|.|......:..|..|   ...||.|
plant   177 GKQVEV-----KRA----------------LPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGR 220

  Fly   227 NDRYDRNLRRSPSRNRYTRNRS 248
            .|           .||:.:::|
plant   221 MD-----------SNRFLQHQS 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	23/81 (28%)
AT4G14300	NP_193166.2	RRM1_hnRNPA_hnRNPD_like	8..78	CDD:409763	2/4 (50%)
		RRM2_Hrp1p	111..188	CDD:409767	25/101 (25%)