Protein Alignment tra2 and PHIP1

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_191094.1
• Gene: PHIP1 / 824700
• AraportID: AT3G55340
• Length: 597
• Species: Arabidopsis thaliana
• Alignment Length: 307
• Identity: 56/307 - (18%)
• Similarity: 93/307 - (30%)
• Gaps: 105/307 - (34%)

  Fly     6 LSSGRLHCSARYKHKRSASSSSAGTT-----------SSGHKDRRSDYDYCGSRRHQRSSSR--- 56
            ||:.:|....|.....|.|.|.:.|.           ||.||.|.|..:   .||:..:.:|
plant     3 LSNKKLKQRIRQDLAESLSVSVSETNPQSQSLKLLLDSSSHKPRLSKRE---KRRNCETFAREDD 64

  Fly    57 --------------------RRSRSR--------------SSSESPPPEPRHRSGRSSRDRERMH 87
                                ::.|.|              :..|..|.:.:::..:..|...:..
plant    65 EIRENEVGNGGSSEKTDTKIKKKRKRDDAVEVDELEGDEGTKEEQKPQKKKNKKKKKKRKVNKTP 129

  Fly    88 KSREHPQASRCIGVFGLNTNT----------------------SQHKVRELFNKYGPIERIQMVI 130
            |..|.......:.|..:..||                      ::.::|..|...|.|.::...:
plant   130 KKAEEGNVEEKVKVEEIEVNTDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKM 194

  Fly   131 DAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVD----GRRIRVDFSITQRAHTPTPGVYLGRQP 191
            ..:.....|..||.|:....|:.|      :..|    |.|.   .:|.|...|.||.:     |
plant   195 RPEDGAFSGIAFITFDTEDGAKRA------LAFDRAAMGDRY---LTIQQYVKTTTPSI-----P 245

  Fly   192 RGKAPRSFSPRRGRRVYHDRSASPYDNYRDRY--DYRNDRYDRNLRR 236
            |.|....|:|..            .|.|...|  :...|..:|::|:
plant   246 RRKTSSGFAPEM------------VDGYNRVYIGNLAWDTTERDIRK 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	16/104 (15%)
PHIP1	NP_191094.1	RRM1_PHIP1	163..234	CDD:409714	13/79 (16%)
		RRM2_PHIP1	263..334	CDD:409715	4/18 (22%)
		PTZ00368	393..592	CDD:173561