Protein Alignment tra2 and CP33

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_190806.1
• Gene: CP33 / 824403
• AraportID: AT3G52380
• Length: 329
• Species: Arabidopsis thaliana
• Alignment Length: 274
• Identity: 62/274 - (22%)
• Similarity: 104/274 - (37%)
• Gaps: 67/274 - (24%)

  Fly    12 HCSARYKHKRSASSSSAGTTS---SGHKDRRSDYDY----------CGS--------RRHQRSSS 55
            :||:......:|::|||.|.:   |.|.:.:..|.:          |.:        |||:...:
plant     5 YCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCA 69

  Fly    56 RRRSRSRSSSE--SPPPEPRHRSGRSSRDRERMHKSREHPQASRCIG---VFGLNTNTSQHKVRE 115
            .....|.:..|  :...|............|.:.:.::..|||...|   |..|....:..::.:
plant    70 AETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQ 134

  Fly   116 LFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHT 180
            :|.:.|.:..:|:|.|..|.|||||.|:....:.:|:.|....:..::.||.::|:|
plant   135 IFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNF-------- 191

  Fly   181 PTPGVYLGRQPRG---KAPRSFSPRRGRRVYHDRSASPYDNYRDRY----------DYRNDR--- 229
              |.|     |||   :..|: ..|...|.|.|   ||:..|....          |...|:
plant   192 --PEV-----PRGGENEVMRT-KIRDNNRSYVD---SPHKVYAGNLGWNLTSQGLKDAFGDQPGV 245

  Fly   230 ------YDRNLRRS 237
                  |:||..||
plant   246 LGAKVIYERNTGRS 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	22/81 (27%)
CP33	NP_190806.1	RRM_SF	117..196	CDD:473069	22/93 (24%)
		RRM2_NsCP33_like	220..295	CDD:410187	8/40 (20%)