Protein Alignment tra2 and AT2G43370

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_850395.1
• Gene: AT2G43370 / 818938
• AraportID: AT2G43370
• Length: 333
• Species: Arabidopsis thaliana
• Alignment Length: 233
• Identity: 51/233 - (21%)
• Similarity: 86/233 - (36%)
• Gaps: 64/233 - (27%)

  Fly    96 SRCIG-------VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARA 153
            |:.:|       |..|:.:|::..:||:.:|||.|:.:::|....|..|||:.|:.:|...:...
plant    56 SKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLR 120

  Fly   154 AKDSCSGIEVDGRRIRVDFSITQ--------------------------------RA-------- 178
            |.:......:|||.|.||::..|                                ||
plant   121 AYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLRPIPHE 185

  Fly   179 -------HTPTPGVYLGRQPRGKAPR---SFSPRRGRRVYHDRSASPYDNYRDR------YDYRN 227
                   ..|..|.|:.|......||   |.|.|.........|....:.:::|      :.:|:
plant   186 DLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEEYYREKSSVEREEEFKERSSLRSYHSHRS 250

  Fly   228 DRYDRNLRRSPSRNRYTRNRSYSRS-RSPQLRRTSSRY 264
            ..:..:..|..|::|...:|..||| |..:.|....||
plant   251 SAHTHSSHRRRSKDREECSREESRSDRKERARGMEDRY 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	25/85 (29%)
AT2G43370	NP_850395.1	RRM_snRNP35	60..150	CDD:409683	25/89 (28%)
		U2AF_lg	218..>324	CDD:273727	15/71 (21%)