DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tra2 and Rbm24

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001074894.1 Gene:Rbm24 / 666794 MGIID:3610364 Length:236 Species:Mus musculus


Alignment Length:113 Identity:33/113 - (29%)
Similarity:57/113 - (50%) Gaps:18/113 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 MHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSD 150
            ||.:::....:: |.|.||..:|:...:|:.|..:|.||...::.|.||.:|||:.|:   .::|
Mouse     1 MHTTQKDTTYTK-IFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFV---TMAD 61

  Fly   151 ARAAKDSCSGIE--VDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAP 196
            ..||:.:|....  :|||:..|:.:            |||.:||...|
Mouse    62 RAAAERACKDPNPIIDGRKANVNLA------------YLGAKPRIMQP 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 25/80 (31%)
Rbm24NP_001074894.1 RRM_RBM24_RBM38_like 11..86 CDD:409818 25/78 (32%)
Necessary for interaction with EIF4E. /evidence=ECO:0000250|UniProtKB:Q9BX46 175..199
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.