Protein Alignment tra2 and hnrnpd

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001025523.1
• Gene: hnrnpd / 594903
• XenbaseID: XB-GENE-988375
• Length: 295
• Species: Xenopus tropicalis
• Alignment Length: 211
• Identity: 54/211 - (25%)
• Similarity: 87/211 - (41%)
• Gaps: 50/211 - (23%)

  Fly    78 RSSRDRERMHKSREH--------PQASRC---------IGVFGLNTNTSQHKVRELFNKYGPIER 125
            :.|...:::.:.:||        |:.::.         |.|.||:.:|.:.|:||.|..:|.||.
 Frog    87 KESEGVDKVMEQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGTFGEIEA 151

  Fly   126 IQMVIDAQTQRSRGFCFIYF------EKLSDARAAKDSCSGIEVDGRRIRVDFS---ITQRAHTP 181
            |::.:|.:|.:.||||||.|      :|:.:.:......|..|     |:|..|   ..|:....
 Frog   152 IELPMDNKTNKRRGFCFITFKEEDPVKKIMEKKYHNVGLSKCE-----IKVALSKEQYQQQQQWG 211

  Fly   182 TPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYD-----------------NYRDRYDYRNDR 229
            |.|.....:|||:...|.:..:|...|.:.|.|.|.                 ||....||.|.:
 Frog   212 TRGGGSSSRPRGRGGVSQTWSQGYSNYWNPSYSSYGYNNQGYGGYGNYDYSGYNYYGYGDYSNQQ 276

  Fly   230 --YDRNLRRSPSRNRY 243
              |.:..||...:|.|
 Frog   277 SGYGKTARRGGHQNSY 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	28/96 (29%)
hnrnpd	NP_001025523.1	RRM1_hnRNPD	40..113	CDD:410150	4/25 (16%)
		RRM2_hnRNPD	124..198	CDD:241027	26/78 (33%)