Protein Alignment tra2 and cirbpa

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001017797.1
• Gene: cirbpa / 550495
• ZFINID: ZDB-GENE-050417-329
• Length: 185
• Species: Danio rerio
• Alignment Length: 183
• Identity: 49/183 - (26%)
• Similarity: 67/183 - (36%)
• Gaps: 68/183 - (37%)

  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            ||:.:|::..:.:.|:|||.|..:.:..:.:|.|||||.|:.||...||:.|.:..:|..||||.
Zfish    11 GLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSVDGRT 75

  Fly   168 IRVDFSITQRAHTPTPGVYLGRQPRGKAPRS-------------------FSPRRGR-------- 205
            ||||.:              |:...|...||                   |...|||
Zfish    76 IRVDEA--------------GKGGGGGGGRSGGGGSYRGGGGGRGGGGGFFRGGRGRGGGGGGYG 126

  Fly   206 ---RVYHDRS-------------------ASPYD-----NYRDRYDYRNDRYD 231
               |.|.|||                   ...|:     .|.||.....|.||
Zfish   127 GGDRSYGDRSYGGGGGGYKSGGGGYSSGGGGGYNRDRGSGYGDRSSSYKDGYD 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	29/71 (41%)
cirbpa	NP_001017797.1	RRM_SF	5..83	CDD:473069	29/85 (34%)