Protein Alignment tra2 and cirbpa

DIOPT Version :9

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001017797.1
• Gene: cirbpa / 550495
• ZFINID: ZDB-GENE-050417-329
• Length: 185
• Species: Danio rerio
• Alignment Length: 183
• Identity: 49/183 - (26%)
• Similarity: 67/183 - (36%)
• Gaps: 68/183 - (37%)

  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            ||:.:|::..:.:.|:|||.|..:.:..:.:|.|||||.|:.||...||:.|.:..:|..||||.
Zfish    11 GLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSVDGRT 75

  Fly   168 IRVDFSITQRAHTPTPGVYLGRQPRGKAPRS-------------------FSPRRGR-------- 205
            ||||.:              |:...|...||                   |...|||
Zfish    76 IRVDEA--------------GKGGGGGGGRSGGGGSYRGGGGGRGGGGGFFRGGRGRGGGGGGYG 126

  Fly   206 ---RVYHDRS-------------------ASPYD-----NYRDRYDYRNDRYD 231
               |.|.|||                   ...|:     .|.||.....|.||
Zfish   127 GGDRSYGDRSYGGGGGGYKSGGGGYSSGGGGGYNRDRGSGYGDRSSSYKDGYD 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	49/183 (27%)
		RRM_TRA2	98..175	CDD:240809	29/71 (41%)
cirbpa	NP_001017797.1	RRM	<2..>81	CDD:223796	29/69 (42%)
		RRM_SF	5..83	CDD:302621	29/85 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48034
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.010