Protein Alignment tra2 and alyref

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001017027.1
• Gene: alyref / 549781
• XenbaseID: XB-GENE-973553
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 262
• Identity: 55/262 - (20%)
• Similarity: 93/262 - (35%)
• Gaps: 52/262 - (19%)

  Fly     1 MDREPLSSGRLHCSARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSS 65
            ::|....:||.....|.....||...:.|....|...........|.....|....|..|:|.:.
 Frog    15 LNRSQRPAGRGRGGGRGARGGSARGGAGGRIGGGRGGGGGGAAGGGGPMRSRPVLTRGGRNRPAP 79

  Fly    66 ESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIG------------VFGLNTNTSQHKVRELFN 118
            .|.|              :::....:|.......|            |..|:...|...::|||.
 Frog    80 YSRP--------------KQLPDKWQHDLFDSGFGTGAGMETGGKLLVSNLDFGVSDADIQELFA 130

  Fly   119 KYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQ------- 176
            ::|.:::..:..| ::.||.|...::||:.:||..|....:|:.:|||.:.:....:|
 Frog   131 EFGTLKKAAVHYD-RSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIEAQRRP 194

  Fly   177 -RAHTPTPGVYLGRQPRGKA-PRSFSPRR-------------GRRVYHDRSASPYDNYRDRYDYR 226
             ::.:...|:   .:|||.| ..|.:.||             ||......||...|...|.|:.|
 Frog   195 IQSQSRGGGI---TRPRGGAIGFSGANRRGGRGGNRGRGRGAGRNPKQQLSAEELDAQLDAYNAR 256

  Fly   227 ND 228
            .|
 Frog   257 MD 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	21/90 (23%)
alyref	NP_001017027.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..89		15/87 (17%)
		RRM_THOC4	109..183	CDD:410081	20/74 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	189..260		17/73 (23%)