DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and eif3g

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001016749.1 Gene:eif3g / 549503 XenbaseID:XB-GENE-6070198 Length:310 Species:Xenopus tropicalis


Alignment Length:161 Identity:43/161 - (26%)
Similarity:62/161 - (38%) Gaps:27/161 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP---PEPRH--------------RSG 77
            ||...:||.....        |:..:.:...|....|..|   |||..              |.|
 Frog   155 TTRCPYKDTLGPM--------QKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 211

  Fly    78 RSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCF 142
            .|.|........|....|:  |.|..|:.:|.:..::|||..:|.|.||.:..|..|.:|:||.|
 Frog   212 GSRRGESMQPNRRADDNAT--IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAF 274

  Fly   143 IYFEKLSDARAAKDSCSGIEVDGRRIRVDFS 173
            |.|.:..||..|....||...|...:.|:::
 Frog   275 ISFHRREDAARAIAGVSGFGYDHLILNVEWA 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 26/78 (33%)
eif3gNP_001016749.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
eIF3G 53..162 CDD:240597 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..229 10/49 (20%)
RRM_eIF3G_like 230..305 CDD:409842 26/76 (34%)
Blue background indicates that the domain is not in the aligned region.

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