Protein Alignment tra2 and rbm39b

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001014392.1
• Gene: rbm39b / 541556
• ZFINID: ZDB-GENE-050327-97
• Length: 539
• Species: Danio rerio
• Alignment Length: 342
• Identity: 61/342 - (17%)
• Similarity: 98/342 - (28%)
• Gaps: 170/342 - (49%)

  Fly    15 ARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGS--RRHQRSSSRRRSRSR---SSSESPPPEPRH 74
            |.|:...|.|||:.|......|.:|..:....|  ||..||..|::||.|   .|.|..|...:.
Zfish    13 APYRKGESKSSSANGHNEERSKKKRRSHSRSPSPGRRRSRSGGRKKSRERRRSRSRERKPSRSKE 77

  Fly    75 RSGRSSRDRERMHKSR---------------------EH-PQASR-------------------- 97
            |....||.::|..:||                     :| |:.||
Zfish    78 RKRSRSRSKDRGGRSRGRKSPFMGQKLNGGPGGKTGPQHFPKHSRKRSRSKSPFKKEKSPFKKDK 142

  Fly    98 ----------------------------------------------------------------- 97
                                                                             
Zfish   143 SPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRS 207

  Fly    98 ----------------CIGVFG-----------------------------------------LN 105
                            .||:.|                                         |:
Zfish   208 KGIAYVEFVDSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMASMLQRGGAGPMRLYVGSLH 272

  Fly   106 TNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRV 170
            .|.::..:|.:|..:|.||.||:::|::|.||:|:.||.|.....|:.|.:..:|.|:.||.::|
Zfish   273 FNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV 337

  Fly   171 DFSITQRAHTPTPGVYL 187
            . .:|:|:...:...:|
Zfish   338 G-HVTERSDASSASSFL 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	29/220 (13%)
rbm39b	NP_001014392.1	SF-CC1	76..526	CDD:273721	40/279 (14%)