DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tra2 and MYEF2

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_057216.3 Gene:MYEF2 / 50804 HGNCID:17940 Length:600 Species:Homo sapiens


Alignment Length:199 Identity:38/199 - (19%)
Similarity:77/199 - (38%) Gaps:35/199 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 REPLSSGRLHCSARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSES 67
            |||      |.:...|.:...||||.|.                  :.:...|.:..:|....:|
Human    31 REP------HPAEAEKQQPQHSSSSNGV------------------KMENDESAKEEKSDLKEKS 71

  Fly    68 PPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELF-NKYGPIERIQMVID 131
            ...:..:|....|:|:......::.|..:| :.:..:..:.....:::|. .|.|.:..:::..|
Human    72 TGSKKANRFHPYSKDKNSGAGEKKGPNRNR-VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD 135

  Fly   132 AQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRV----DFSITQRAHTPTPGVYLGRQPR 192
            |: .:|||...:.|:.....:.|.::.:..::.||.:.:    |....:||...|.|.:    |.
Human   136 AE-GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSF----PG 195

  Fly   193 GKAP 196
            |..|
Human   196 GHVP 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 14/83 (17%)
MYEF2NP_057216.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101 17/93 (18%)
RRM1_MYEF2 101..176 CDD:410059 13/76 (17%)
PABP-1234 124..>596 CDD:130689 18/81 (22%)
RRM2_MYEF2 233..308 CDD:410061
RRM3_MYEF2 524..600 CDD:410063
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.