Protein Alignment tra2 and Tra2a

DIOPT Version :9

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001119768.2
• Gene: Tra2a / 500116
• RGDID: 1562563
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 258
• Identity: 112/258 - (43%)
• Similarity: 148/258 - (57%)
• Gaps: 32/258 - (12%)

  Fly    15 ARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRS 79
            :::....|.|.|.:.:.|..|..||    |..||.|   |.||||||||.:    ||.|.|..||
  Rat    43 SKHSESHSRSRSKSRSRSRRHSHRR----YTRSRSH---SHRRRSRSRSYT----PEYRRRRSRS 96

  Fly    80 ---SRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFC 141
               ..:|.|...||.:|..:.|:|||||:..|::..:||:|::|||:..:.:|.|.:|.|||||.
  Rat    97 HSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFA 161

  Fly   142 FIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPR---------GKAPR 197
            |:|||::.|::.|.:..:|:|:||||||||:|||:||||||||:|:||...         |....
  Rat   162 FVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGG 226

  Fly   198 SFSPRRGRRVYHDRSAS-PYDNYRDRYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRSPQLRR 259
            .....|.|..|:||... .||.|.| |||      |..||||| ..|:|.||.|||||...||
  Rat   227 GGGGGRRRDSYYDRGYDRGYDRYED-YDY------RYRRRSPS-PYYSRYRSRSRSRSYSPRR 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	78/180 (43%)
		RRM_TRA2	98..175	CDD:240809	38/76 (50%)
Tra2a	NP_001119768.2	RRM_TRA2	116..195	CDD:409798	38/78 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166345868
Domainoid	1	1.000	85	1.000	Domainoid score	I7985
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	174	1.000	Inparanoid score	I3976
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001901
OrthoInspector	1	1.000	-	-		otm45481
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR48034
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1620
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	10	9.950