Protein Alignment tra2 and snrnp70

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001268699.1
• Gene: snrnp70 / 493488
• XenbaseID: XB-GENE-992818
• Length: 471
• Species: Xenopus tropicalis
• Alignment Length: 250
• Identity: 75/250 - (30%)
• Similarity: 109/250 - (43%)
• Gaps: 48/250 - (19%)

  Fly    37 DRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPP---EPR-HRSGRSSRDR-ERMHKSREHP--- 93
            ::..:..|||...:.|.....|       ::|||   |.| .|..|..|:: ||..:..|:.
 Frog    31 EKHHNQPYCGIAPYIREFEDPR-------DAPPPTRAETREERMERKRREKIERRQQDVENELKI 88

  Fly    94 -----------QASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEK 147
                       .|.:.:.|..:|.:|::.|:|..|..||||:||.||.:.::.:.||:.||.:|.
 Frog    89 WDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEH 153

  Fly   148 LSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSF-----SPRRGRRV 207
            ..|..:|.....|.::||||:.||             |..||..:|..||..     ..|||...
 Frog   154 ERDMHSAYKHADGKKIDGRRVLVD-------------VERGRTVKGWRPRRLGGGLGGTRRGGAD 205

  Fly   208 YHDRSASPYDNYRDRYDYRN-DRYDRNLRRSPSRNRYTRNRSYSRSRSPQLRRTS 261
            .:.|.:...|.  .|||.|: ||.....||..||.| .:.|...||||.:.||.|
 Frog   206 VNIRHSGRDDT--SRYDERDRDRERERDRRERSRER-DKERERRRSRSRERRRRS 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	28/78 (36%)
snrnp70	NP_001268699.1	U1snRNP70_N	3..94	CDD:432406	16/69 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..78		10/36 (28%)
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		36/122 (30%)
		RRM_snRNP70	102..187	CDD:409682	31/97 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..471		25/73 (34%)