Protein Alignment tra2 and srsf1

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001006919.1
• Gene: srsf1 / 448766
• XenbaseID: XB-GENE-486875
• Length: 267
• Species: Xenopus tropicalis
• Alignment Length: 240
• Identity: 60/240 - (25%)
• Similarity: 78/240 - (32%)
• Gaps: 103/240 - (42%)

  Fly   113 VRELFNKYGPIERIQMVIDAQTQRSRG---FCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSI 174
            :.::|.|||.|.      |...:..||   |.|:.||...||..|.....|.:.||.|:||:|
 Frog    32 IEDVFYKYGAIR------DIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF-- 88

  Fly   175 TQRAHTPTPGVYLGRQ-----------------------PRGKAPRS-FSPRRGRRVY------- 208
                  |..|...|.:                       ..|.|||. :.|...|..|
 Frog    89 ------PRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGL 147

  Fly   209 -----------HDRSASPY---DNYRD------------------RYDY---------------- 225
                       |.|.|...   |.:||                  :.|.
 Frog   148 PPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 212

  Fly   226 ----RNDRYDRNLRRSPSRNRYTRNRSYSRSR--SPQLRRTSSRY 264
                |:..|.|:..||.||:| :|:||.||||  ||:..|.|.||
 Frog   213 VDGPRSPSYGRSRSRSRSRSR-SRSRSNSRSRSYSPRRSRGSPRY 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	22/64 (34%)
srsf1	NP_001006919.1	RRM1_SRSF1	12..90	CDD:410010	22/71 (31%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	90..137		7/46 (15%)
		RRM2_SRSF1	132..215	CDD:410160	10/82 (12%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..267		21/46 (46%)