DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and dazap1

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_012815264.1 Gene:dazap1 / 448406 XenbaseID:XB-GENE-856469 Length:411 Species:Xenopus tropicalis


Alignment Length:150 Identity:40/150 - (26%)
Similarity:72/150 - (48%) Gaps:9/150 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVF--GLNTNTSQHKVREL 116
            :||..:....:.:..|..||......:|.||...:.....:.||...:|  |:..|..:.::||.
 Frog    69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETELREY 133

  Fly   117 FNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGI---EVDGRRIRVDFSITQRA 178
            |.::|.:..:.|:.||:.||.|||.||.||   |.::. |....:   ::.|:::.|..:..:.:
 Frog   134 FKRFGVVTEVVMIYDAEKQRPRGFGFITFE---DEQSV-DQAVNMHFHDIMGKKVEVKRAEPRDS 194

  Fly   179 HTPTPGVYLGRQPRGKAPRS 198
            .:.|||.....|..|:|.:|
 Frog   195 KSQTPGPPGSNQWGGRAMQS 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 25/83 (30%)
dazap1XP_012815264.1 RRM1_DAZAP1 11..92 CDD:409988 5/22 (23%)
RRM2_DAZAP1 112..191 CDD:409765 24/82 (29%)

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