DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment tra2 and hnrnpabb

DIOPT Version :9

Sequence 1:	NP_476764.1	Gene:	tra2 / 36619	FlyBaseID:	FBgn0003742	Length:	264	Species:	Drosophila melanogaster
Sequence 2:	NP_998467.1	Gene:	hnrnpabb / 406594	ZFINID:	ZDB-GENE-040426-2516	Length:	309	Species:	Danio rerio

Alignment Length:	207	Identity:	49/207 - (23%)
Similarity:	79/207 - (38%)	Gaps:	39/207 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    71 EPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQ 135
            :..||......|.:|....::.|.....:|  |||..|::.|:||.|..:|.||.|::..|.:|.
Zfish   105 QKEHRLDGRQIDPKRAMAIKKEPVKKIFVG--GLNPETTEEKIREYFGSFGEIETIELPTDPKTS 167

  Fly   136 RSRGFCFIYF------EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGK 194
            :.|||.||.|      :|:.:.:......|..|:   :|.....|.|:......|...|.:.||:
Zfish   168 KRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEI---KIAQPKEIYQQQQFGARGGGFGGRGRGR 229

  Fly   195 APRSFSPRRGRRVYHDRS-------------------------ASPYDNYRDRYDYRND---RYD 231
            .....|..:|...|.::.                         :|.|..|...|||.:.   .|.
Zfish   230 GGPGQSWNQGYNNYWNQGYGGQGYGYGGQQGYGGYGGYGNYDYSSGYYGYGSGYDYTDQGAASYG 294

  Fly   232 RNLRRSPSRNRY 243
            :..||...::.|
Zfish   295 KTPRRGGHQSGY 306

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	48/201 (24%)
tra2	NP_476764.1	RRM_TRA2	98..175	CDD:240809	25/82 (30%)
hnrnpabb	NP_998467.1	CBFNT	2..45	CDD:285369
		RRM1_hnRNPAB	46..120	CDD:241201	3/14 (21%)
		RRM_SF	125..204	CDD:302621	25/83 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910