DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and rbm14b

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_021333123.2 Gene:rbm14b / 402858 ZFINID:ZDB-GENE-040426-2455 Length:560 Species:Danio rerio


Alignment Length:134 Identity:35/134 - (26%)
Similarity:58/134 - (43%) Gaps:20/134 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 RHRSGRSSRDRER-MHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQR 136
            |..:||..:.|.. :.:||..|..|..:.|..|::..:...::|||..:|.:        .:..:
Zfish    58 RELNGREFKGRNLVVEESRGRPLHSTKVFVGNLSSMCTTEDLQELFQTFGKV--------LECDK 114

  Fly   137 SRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRA-HTPT----------PGVYLGRQ 190
            .:|:.|::.|...||..|.::..|....||.:.|:.|..|.: .|||          .|.|.|..
Zfish   115 VKGYAFVHMENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQGHYAGEC 179

  Fly   191 PRGK 194
            |.||
Zfish   180 PAGK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 18/78 (23%)
rbm14bXP_021333123.2 None

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