Protein Alignment tra2 and tra2b

DIOPT Version :9

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_957491.1
• Gene: tra2b / 394172
• ZFINID: ZDB-GENE-040426-1094
• Length: 278
• Species: Danio rerio
• Alignment Length: 269
• Identity: 119/269 - (44%)
• Similarity: 152/269 - (56%)
• Gaps: 40/269 - (14%)

  Fly     2 DREPLSSGRLHCSARYKHKR--SASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRS- 63
            :|.|     .|...|..|.|  |.|.|.:.|.|..|:..|..|....||.:.|   ||||||||
Zfish    34 ERSP-----AHSKERSHHSRSKSRSRSRSKTRSRSHRSSRRHYSRSRSRSYSR---RRRSRSRSY 90

  Fly    64 SSESPPPEPRHRSGRSSRDRERMHKSREH------PQASRCIGVFGLNTNTSQHKVRELFNKYGP 122
            |||      .||. |||.....|...|.|      |..:.|:|||||:..|::..:||:|:||||
Zfish    91 SSE------YHRR-RSSHSHSPMSNRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGP 148

  Fly   123 IERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYL 187
            :..:.:|.|.|::|||||..:|||...|::.||:..:|:|:||||||||:|||:..||||||:|:
Zfish   149 LSDVCIVYDQQSRRSRGFALVYFENREDSKEAKERANGMELDGRRIRVDYSITKGPHTPTPGIYM 213

  Fly   188 GRQPRGKAPRSFSPRRGRRVYHDRS-ASPYDNYRDRYDYRNDRYDRNLRRSP----SRNRYTRNR 247
            ||...|..| |.|.||..   :||. ...||:|.|| ||.|:|     ||||    ||..| |:|
Zfish   214 GRPTYGGGP-SVSRRRDS---YDRGYERGYDSYEDR-DYHNNR-----RRSPSPYYSRGPY-RSR 267

  Fly   248 SYSRSRSPQ 256
            |.|||.||:
Zfish   268 SRSRSYSPR 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	82/178 (46%)
		RRM_TRA2	98..175	CDD:240809	39/76 (51%)
tra2b	NP_957491.1	RRM_TRA2B	114..202	CDD:241085	41/87 (47%)
		RRM	<118..>199	CDD:223796	39/80 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	81	1.000	Domainoid score	I8460
eggNOG	1	0.900	-	-		E33208_3BKR9
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H137664
Inparanoid	1	1.050	178	1.000	Inparanoid score	I4021
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001901
OrthoInspector	1	1.000	-	-		otm24231
orthoMCL	1	0.900	-	-		OOG6_103481
Panther	1	1.100	-	-	O	PTHR48034
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1765
SonicParanoid	1	1.000	-	-		X1620
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	13	12.850