Protein Alignment tra2 and TBPH

DIOPT Version :9

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001163280.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Alignment Length: 274
• Identity: 55/274 - (20%)
• Similarity: 97/274 - (35%)
• Gaps: 73/274 - (26%)

  Fly    45 CGSR-RHQRSSSRRRSRSRSSSESPPPE-------------PRHRSGRSSRDRER-MHKSREHPQ 94
            ||.: |:..:.:.|..||......||..             |:....:|..:.|. ..|::....
  Fly    38 CGLKYRNLDTKAVRGVRSNEGRLFPPSVESGWGEYAYFCVFPKENKRKSDDNLENSTAKTKRIET 102

  Fly    95 ASRC--IGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDS 157
            ..||  :.|.||...|::..:||.|..||.:...|:..|.::.:|:||.|:.|... ||:....:
  Fly   103 RLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSY-DAQMRVLT 166

  Fly   158 CSGIEVDGR--RIRVDFSITQRAHTPTPGVYLGR--------------QPRGKAPRSFSPR---- 202
            ...: :|||  .::|..|.......|.. |::||              ...|:....|.||
  Fly   167 NRHL-IDGRWCEVKVPNSKGMGHQVPCK-VFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRA 229

  Fly   203 ----------------------RGRRVYHDRSASPYDNYRDR----YDYR-------NDRYDRNL 234
                                  :|..|:...:|...:..|::    |:|.       :..:.:..
  Fly   230 FSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYHPQGN 294

  Fly   235 RRSPSRNRYTRNRS 248
            ..:|.||.:.|..:
  Fly   295 HMNPGRNGHHRGNN 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	44/223 (20%)
		RRM_TRA2	98..175	CDD:240809	24/80 (30%)
TBPH	NP_001163280.1	RRM1_TDP43	108..184	CDD:240767	22/77 (29%)
		RRM2_TDP43	192..261	CDD:240768	9/69 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910