Protein Alignment tra2 and Snrnp70

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001386570.1
• Gene: Snrnp70 / 361574
• RGDID: 1307120
• Length: 451
• Species: Rattus norvegicus
• Alignment Length: 290
• Identity: 80/290 - (27%)
• Similarity: 113/290 - (38%)
• Gaps: 89/290 - (30%)

  Fly    37 DRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREH--------- 92
            ::..:..|||...:.|.....|       ::|||.      |:....|||.:.|..
  Rat    31 EKHHNQPYCGIAPYIREFEDPR-------DAPPPT------RAETREERMERKRREKIERRQQEV 82

  Fly    93 ------------PQAS----RCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFC 141
                        |.|.    :.:.|..:|.:|::.|:|..|..||||:||.||...::.:.||:.
  Rat    83 ETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147

  Fly   142 FIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSF-----SP 201
            ||.:|...|..:|.....|.::||||:.||             |..||..:|..||..     ..
  Rat   148 FIEYEHERDMHSAYKHADGKKIDGRRVLVD-------------VERGRTVKGWRPRRLGGGLGGT 199

  Fly   202 RRG-------------RRVYHDR---SASPY-DNYRDRYDYRNDR-----YDRNLRRSPSRNRYT 244
            |||             ...|.:|   |..|: |..|||...|.:|     .:|..|||.||:|..
  Rat   200 RRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRR 264

  Fly   245 RNRS-------YSRSRSP----QLRRTSSR 263
            |:||       .||.||.    ..:|.|||
  Rat   265 RSRSRDKDERRRSRERSKDKDRDRKRRSSR 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	28/82 (34%)
Snrnp70	NP_001386570.1	U1snRNP70_N	3..94	CDD:432406	13/75 (17%)
		RRM_snRNP70	102..187	CDD:409682	31/97 (32%)