Protein Alignment tra2 and Snrnp35

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001014149.1
• Gene: Snrnp35 / 360803
• RGDID: 1310724
• Length: 244
• Species: Rattus norvegicus
• Alignment Length: 179
• Identity: 50/179 - (27%)
• Similarity: 83/179 - (46%)
• Gaps: 30/179 - (16%)

  Fly   104 LNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFI-YFEKLSDARAAKDSCSGIEVDGRR 167
            ||:.|.:.|::|:|::||.|.|:::|.|..|..|:|:.|| |.|:.:..:|.:|: .|:.:|...
  Rat    58 LNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDA-DGLVIDQHE 121

  Fly   168 IRVDFSI--TQRAHTPTP-GVYLGRQPR------GKAPRSFSP------------RRGRRVYHDR 211
            |.||:.:  |.|...|.. |..||.:..      |...|.|..            |.|:|...:|
  Rat   122 IFVDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNEPHREGKRERRER 186

  Fly   212 SAS------PYDNYRDRYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRS 254
            |.|      |....|| :|...:::.::..|....|.:.|.|.:...|:
  Rat   187 SRSRDRHWDPRPRERD-HDRGREKHWQDRARVWPENDWEREREFRDERA 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	26/73 (36%)
Snrnp35	NP_001014149.1	RRM_snRNP35	47..137	CDD:409683	28/79 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	146..244		18/90 (20%)