DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and CG10466

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster


Alignment Length:101 Identity:30/101 - (29%)
Similarity:53/101 - (52%) Gaps:9/101 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 EPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQ 135
            |.:|...:|..|   |:|.      |..|.|.|.....::..:..:|::||.:..|.::.|::|.
  Fly    17 ELQHGGKKSWHD---MYKD------SAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTG 72

  Fly   136 RSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVD 171
            :|:||||:.:|.......|.|:.:||::..|.:|||
  Fly    73 KSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVD 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 24/76 (32%)
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 28/93 (30%)

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