Protein Alignment tra2 and Ref2

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 45/224 - (20%)
• Similarity: 82/224 - (36%)
• Gaps: 63/224 - (28%)

  Fly    46 GSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQ 110
            ||.|.:.|....|...||         |:.:|...:.:.:.....:.|:....:.|..|:.....
  Fly    33 GSIRKRNSEGGLRGIQRS---------RNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDD 88

  Fly   111 HKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSIT 175
            ..:.||||:.|.:|:..:..| :...|.|...:.|:...:|....:...|:.:||||::
  Fly    89 DDIMELFNQDGVVEKGFVHYD-RDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLK------ 146

  Fly   176 QRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNYRDRYDYRNDRYDRNLRRSPSR 240
                     ::|.:..|                         |::     |.|..|.:||....:
  Fly   147 ---------LHLVQNTR-------------------------NFK-----RTDVDDLSLRMGSFK 172

  Fly   241 NRYTRNRSYSRSRSPQ-------LRRTSS 262
            .|:.:|.:: ::||.|       |.|.||
  Fly   173 TRFLQNGTF-KTRSLQNGFQKSRLFRNSS 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	18/78 (23%)
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	18/89 (20%)