Protein Alignment tra2 and Caper

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 272
• Identity: 58/272 - (21%)
• Similarity: 96/272 - (35%)
• Gaps: 95/272 - (34%)

  Fly    15 ARYKHKRSASSSSAGTTSSGHKDRRSDYDYC---GSRRHQRSSSRRRSRSRSSSESPPPE--PRH 74
            :|.|.:||.|........|..::|:..:...   .|||...:|.||||....:..:.|.|  |..
  Fly   169 SRDKRRRSRSRDQQRKRLSPIRERKRSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEE 233

  Fly    75 RSGRS-----------SRDRERMHKS--------------------------------------- 89
            |..|:           :||.|....|
  Fly   234 RDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLS 298

  Fly    90 ----------REHPQASR-------------------CIGVFGLNTNTSQHKVRELFNKYGPIER 125
                      .:|.||.:                   .:.|..|:.|.::..:|.:|..:|.|:.
  Fly   299 GQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDA 363

  Fly   126 IQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPT-------- 182
            ||:::|.:|.||:|:.||.:....||:.|.:..:|.|:.||.::|. ::|:|....|
  Fly   364 IQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVG-NVTERLDMNTTSLDTDEM 427

  Fly   183 --PGVYLGRQPR 192
              .|:.||...|
  Fly   428 DRTGIDLGATGR 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	24/97 (25%)
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	47/228 (21%)