Protein Alignment tra2 and x16

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Alignment Length: 177
• Identity: 51/177 - (28%)
• Similarity: 74/177 - (41%)
• Gaps: 28/177 - (15%)

  Fly    92 HPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKD 156
            || :.|.:.|..|..|..::.:..:|..||.:..:.:     .:...||.|:.||...||..|..
  Fly     4 HP-SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWI-----ARNPPGFAFVEFESARDAADAVR 62

  Fly   157 SCSGIEVDGRRIRVDFSITQRAHT---------PTPGVYLGRQPRGKAPRSFSP-----RRGRRV 207
            ...|..|.|||.||:.|..:.|.:         ...|..||.:.||...|....     .||...
  Fly    63 GLDGRTVCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFA 127

  Fly   208 YHDRSASPYDNYRDRYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRS 254
            .|.|..      :.|...|::.:.|:  ||.||.|.||::|.:||||
  Fly   128 RHCRER------KARQRRRSNSFSRS--RSTSRRRRTRSKSGTRSRS 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	23/78 (29%)
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	22/76 (29%)