Protein Alignment tra2 and SPOM_SPAC25G10.01

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001342863.1
• Gene: SPOM_SPAC25G10.01 / 3361412
• PomBaseID: SPAC25G10.01
• Length: 297
• Species: Schizosaccharomyces pombe
• Alignment Length: 247
• Identity: 64/247 - (25%)
• Similarity: 117/247 - (47%)
• Gaps: 34/247 - (13%)

  Fly    33 SGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASR 97
            :|..|  ||........||..::....:|.:..|   .:|.:.|  ::.|::   :.:..|:.|.
pombe    43 AGETD--SDAGSIAMNVHQLDTAGEPLQSMNEDE---VDPNNES--TALDKK---EPQSAPEGSE 97

  Fly    98 CIG----VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSC 158
            .:|    |.|:.:...:.:::::|:|:|.:..::::.:..|:.||||.|:.|..:.:|.:|.|:.
pombe    98 NLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162

  Fly   159 SGIEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRR-----GRRVYHDRSASPYDN 218
            :..|..||.:.|..:...|.|:||||.|:| ..|.:..|.|....     .|..|.||.::.|.|
pombe   163 NSQEFYGRVLNVQKAKRSRPHSPTPGKYMG-YDRRRNSRDFPSNNKDGGYRRNNYRDRDSNRYRN 226

  Fly   219 -YRDRY--------DYRNDRYDRNLRRSPSRNRYTRNRSYSRSRS---PQLR 258
             ||...        :||.:||  |:...|.|.|:...||::.:..   |.:|
pombe   227 SYRPSRPQREHSPGNYRKERY--NVDSRPRRERHFHGRSFAHAEHHSVPNMR 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	21/82 (26%)
SPOM_SPAC25G10.01	NP_001342863.1	PABP-1234	56..>201	CDD:130689	38/153 (25%)
		RRM	103..174	CDD:214636	18/70 (26%)
		U2AF_lg	207..>283	CDD:273727	20/72 (28%)