DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and CG11454

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster


Alignment Length:69 Identity:19/69 - (27%)
Similarity:25/69 - (36%) Gaps:8/69 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 LLSETKQTKTEYQQDSDPEENQELPK----AKIFIERLEEIAHDPANGIDEDGFQQHIDTMMFGG 314
            ||...|:.:|.:..:..|.:.|..|:    .|..|..|.. ...||.|......|.|   ...||
  Fly   611 LLEALKKNETMHFYEQQPSQQQHTPEQDSVQKFQILNLGN-GGKPAGGATATATQPH---SAAGG 671

  Fly   315 NDTS 318
            .|.|
  Fly   672 QDES 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773
Blue background indicates that the domain is not in the aligned region.

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