Protein Alignment tra2 and rbmx

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_997763.1
• Gene: rbmx / 321860
• ZFINID: ZDB-GENE-030131-579
• Length: 379
• Species: Danio rerio
• Alignment Length: 162
• Identity: 49/162 - (30%)
• Similarity: 71/162 - (43%)
• Gaps: 29/162 - (17%)

  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            ||||.||:..:...|:|:|.|..:.::.|.:|.:||||.|:.:|...||:.|....:|..:||:.
Zfish    14 GLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNGKPLDGKP 78

  Fly   168 IRVDFSITQRAHTPTPGVYLGRQPRG-KAPRSFSPRRGRRVYHDRSASPYDNYRDRYDYRNDRYD 231
            |:|:.:...:..|.      ||  || ..|||..|.||.|   .....|
Zfish    79 IKVEQATKPQFETS------GR--RGPPPPRSRGPSRGLR---GSRGGP---------------- 116

  Fly   232 RNLRRSPSRNRYTRNRSYSRSRSPQLRRTSSR 263
            ..:|..|||..:.:..| ||...|..|....|
Zfish   117 SGMRGPPSREPFFKGMS-SRGPPPMKRGPPER 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	26/71 (37%)
rbmx	NP_997763.1	RRM_RBMX_like	7..86	CDD:409816	26/71 (37%)
		PABP-1234	<10..204	CDD:130689	49/162 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	57..379		32/119 (27%)