Sequence 1: | NP_476764.1 | Gene: | tra2 / 36619 | FlyBaseID: | FBgn0003742 | Length: | 264 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112556.2 | Gene: | HNRNPAB / 3182 | HGNCID: | 5034 | Length: | 332 | Species: | Homo sapiens |
Alignment Length: | 218 | Identity: | 50/218 - (22%) |
---|---|---|---|
Similarity: | 86/218 - (39%) | Gaps: | 41/218 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 RSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIE 124
Fly 125 RIQMVIDAQTQRSRGFCFIYF------EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTP 183
Fly 184 GVYLGRQPRGK---------APRSFSPRRGRRVY-----------------HDRSASPYDNYRDR 222
Fly 223 YDYR--NDRYDRNLRRSPSRNRY 243 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tra2 | NP_476764.1 | RRM | <74..242 | CDD:223796 | 46/201 (23%) |
RRM_TRA2 | 98..175 | CDD:240809 | 23/82 (28%) | ||
HNRNPAB | NP_112556.2 | CBFNT | 1..70 | CDD:311868 | |
RRM1_hnRNPAB | 66..145 | CDD:410151 | 5/25 (20%) | ||
RRM2_hnRNPAB | 150..229 | CDD:409997 | 24/83 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |