DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tra2 and Tia1

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_063142135.1 Gene:Tia1 / 312510 RGDID:1305742 Length:398 Species:Rattus norvegicus


Alignment Length:75 Identity:20/75 - (26%)
Similarity:46/75 - (61%) Gaps:1/75 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDG 165
            |..|:.:.::..:.:||::.||.:..:|::| ||..:..:||:.|.:...|.||..:.:|.::.|
  Rat    11 VGNLSRDVTEALILQLFSQIGPCKNCKMIMD-QTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMG 74

  Fly   166 RRIRVDFSIT 175
            :.::|:::.|
  Rat    75 KEVKVNWATT 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 19/73 (26%)
Tia1XP_063142135.1 None

Return to query results.
Submit another query.